Populus euphratica (Euphrates poplar): 105111208
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Entry
105111208 CDS
T05872
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105111208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105111208
Spliceosome [BR:
peu03041
]
Common components
Common spliceosomal components
SR proteins
105111208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
105111208
NCBI-ProteinID:
XP_011004808
LinkDB
All DBs
Position
Unknown
AA seq
270 aa
AA seq
DB search
MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA
FVRYKYAEEAQKAVDKLDGRVVDGREIMVQFAKYGPNAERIQSGRIVESSSKIKGRSRSR
SPRPRYRDGYRDKDRDRDYRRRSRSRSRDRYDRDGYRGRDRDYHPRSVSHSPDHRKECGR
GHDEKRRRRSQSYGSPNSPRSPSPHRAHPRDRSPNGRNDNKCSPNGSPNSPRSPSPHRAH
PRDGSPNGRNDNKRSPTSKGVSPCNEPVES
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatttcggccgatctggtcctccagatatcagagacaccttttctctccttgtt
ctcaacatcactttccgaaccactgccgacgatcttttccctctctttgacaagtacggc
aaggtagtcgatgtattcataccccgcgatcggaggactggagaatcgagaggctttgcg
tttgtgaggtataaatacgctgaagaggcgcagaaggcagttgataagcttgatggcaga
gttgtggatgggagagagattatggtgcaattcgctaagtatgggcccaacgctgagcga
attcagagtgggaggatagtggaatcatcttcaaagattaaaggtaggtctagaagccgc
agccctcgtccaaggtatcgagatggctacagggacaaggacagggacagggattacaga
aggagaagtcgcagtagaagcagagatcgttatgaccgtgatgggtatcgaggtagggat
agagattatcatccccgaagcgtgagccacagcccagatcatcgcaaagaatgtggtaga
ggacatgatgagaaacgacgccgtcggagccagtcttatggaagccctaattctccgagg
agcccttctccacaccgggcacatcctagggatagaagccctaatggacgcaatgataac
aaatgctcacctaatggaagccctaattctccaaggagcccttctccacacagggcacat
cctagggatggaagtcctaatggacgcaatgataacaaacgctcacctacttcaaagggt
gtctcaccttgcaatgaaccagttgagtcttga
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