KEGG   Populus euphratica (Euphrates poplar): 105132154
Entry
105132154         CDS       T05872                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03030  DNA replication
peu03410  Base excision repair
peu03420  Nucleotide excision repair
peu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105132154
   03410 Base excision repair
    105132154
   03420 Nucleotide excision repair
    105132154
   03430 Mismatch repair
    105132154
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:peu03032]
    105132154
   03036 Chromosome and associated proteins [BR:peu03036]
    105132154
   03400 DNA repair and recombination proteins [BR:peu03400]
    105132154
DNA replication proteins [BR:peu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105132154
  DNA Replication Termination Factors
   ELG1-RFC complex
    105132154
Chromosome and associated proteins [BR:peu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105132154
DNA repair and recombination proteins [BR:peu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105132154
  Check point factors
   HRAD17(Rad24)-RFC complex
    105132154
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 Mg_chelatase AAA_22 Viral_helicase1 Rad17 AAA_16 RuvB_N AAA_24 AAA_11 AAA_5 AAA_19 AAA_25 nSTAND3 AAA_assoc_2 AAA_18 ABC_tran MeaB AAA_30 AAA_28 RNA_helicase IstB_IS21 AAA_3 bpMoxR DO-GTPase1 SLFN-g3_helicase NTPase_1 KTI12 T2SSE AAA_7 UvrD-helicase
Other DBs
NCBI-GeneID: 105132154
NCBI-ProteinID: XP_011033786
LinkDB
Position
Unknown
AA seq 330 aa
MASSSNSSNYDIPWVEKYRPSKVADIVGNQDAVSRLQVIARDGNMPNLILAGPPGTGKTT
SILALAHELLGPNSKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIVILDEAD
SMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMV
VVGAEQVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFHFVNQENVFKVCDQPHPLHVK
NMVRQVLEGKFDDACSGLKHLYDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH
MRICDGVGSYLQLCGLLAKLALVRDTAKAA
NT seq 993 nt   +upstreamnt  +downstreamnt
atggcatcatcgagcaacagcagtaactacgacattccatgggtagagaaatacaggccc
agcaaagtcgctgacatcgtgggcaaccaagacgccgtctctcgcctccaagtcattgct
cgcgatggaaacatgcctaatctcattttagccggtcctcctggaactggcaaaactaca
agtatcttggctcttgcacatgagcttctgggaccaaattcaaaggaggctgtcttggag
ctgaacgcatcagatgacaggggtatagatgttgtgaggaacaaaattaagatgtttgca
caaaagaaagtgacactgcctcctggacaacacaaaattgtaattcttgatgaagcagat
agcatgacatctggagcacaacaagccctgagacgaaccatggaaatatattcaaattcc
actcggtttgctcttgcatgcaacacatcttctaaaattattgagcctattcaaagtaga
tgtgccattgttcgattttcaagattatctgatcaagagatacttggtcgtctcatggtt
gtagttggagcagagcaggtcccttacgttcctgaaggtcttgaagctattatatttact
gctgatggagatatgaggcaggccttgaacaacttgcaggctacacatagtggattccat
tttgtcaaccaggaaaatgttttcaaggtctgtgatcagcctcatccattgcatgtgaag
aatatggtgcgccaggtgcttgagggaaaatttgatgatgcttgttctggtctgaagcat
ctctatgatatgggctattcccccactgacataattacaacccttttccgaatcataaag
aattatgatatggctgaatatctgaaattggagttcatgaaggaaactgggtttgcccat
atgagaatctgcgatggtgttggttcgtatcttcagctctgtggcctgttggccaagctt
gccttagttcgtgacacagccaaagcagcataa

DBGET integrated database retrieval system