Populus euphratica (Euphrates poplar): 105132154
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Entry
105132154 CDS
T05872
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03030
DNA replication
peu03410
Base excision repair
peu03420
Nucleotide excision repair
peu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105132154
03410 Base excision repair
105132154
03420 Nucleotide excision repair
105132154
03430 Mismatch repair
105132154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
peu03032
]
105132154
03036 Chromosome and associated proteins [BR:
peu03036
]
105132154
03400 DNA repair and recombination proteins [BR:
peu03400
]
105132154
DNA replication proteins [BR:
peu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105132154
DNA Replication Termination Factors
ELG1-RFC complex
105132154
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105132154
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105132154
Check point factors
HRAD17(Rad24)-RFC complex
105132154
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
Mg_chelatase
AAA_22
Viral_helicase1
Rad17
AAA_16
RuvB_N
AAA_24
AAA_11
AAA_5
AAA_19
AAA_25
nSTAND3
AAA_assoc_2
AAA_18
ABC_tran
MeaB
AAA_30
AAA_28
RNA_helicase
IstB_IS21
AAA_3
bpMoxR
DO-GTPase1
SLFN-g3_helicase
NTPase_1
KTI12
T2SSE
AAA_7
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
105132154
NCBI-ProteinID:
XP_011033786
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MASSSNSSNYDIPWVEKYRPSKVADIVGNQDAVSRLQVIARDGNMPNLILAGPPGTGKTT
SILALAHELLGPNSKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIVILDEAD
SMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMV
VVGAEQVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFHFVNQENVFKVCDQPHPLHVK
NMVRQVLEGKFDDACSGLKHLYDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH
MRICDGVGSYLQLCGLLAKLALVRDTAKAA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatcgagcaacagcagtaactacgacattccatgggtagagaaatacaggccc
agcaaagtcgctgacatcgtgggcaaccaagacgccgtctctcgcctccaagtcattgct
cgcgatggaaacatgcctaatctcattttagccggtcctcctggaactggcaaaactaca
agtatcttggctcttgcacatgagcttctgggaccaaattcaaaggaggctgtcttggag
ctgaacgcatcagatgacaggggtatagatgttgtgaggaacaaaattaagatgtttgca
caaaagaaagtgacactgcctcctggacaacacaaaattgtaattcttgatgaagcagat
agcatgacatctggagcacaacaagccctgagacgaaccatggaaatatattcaaattcc
actcggtttgctcttgcatgcaacacatcttctaaaattattgagcctattcaaagtaga
tgtgccattgttcgattttcaagattatctgatcaagagatacttggtcgtctcatggtt
gtagttggagcagagcaggtcccttacgttcctgaaggtcttgaagctattatatttact
gctgatggagatatgaggcaggccttgaacaacttgcaggctacacatagtggattccat
tttgtcaaccaggaaaatgttttcaaggtctgtgatcagcctcatccattgcatgtgaag
aatatggtgcgccaggtgcttgagggaaaatttgatgatgcttgttctggtctgaagcat
ctctatgatatgggctattcccccactgacataattacaacccttttccgaatcataaag
aattatgatatggctgaatatctgaaattggagttcatgaaggaaactgggtttgcccat
atgagaatctgcgatggtgttggttcgtatcttcagctctgtggcctgttggccaagctt
gccttagttcgtgacacagccaaagcagcataa
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integrated database retrieval system