Plasmodium falciparum 3D7: PF3D7_0218000
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Entry
PF3D7_0218000 CDS
T00095
Name
(RefSeq) replication factor C subunit 2, putative
KO
K10755
replication factor C subunit 2/4
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03030
DNA replication
pfa03410
Base excision repair
pfa03420
Nucleotide excision repair
pfa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PF3D7_0218000
03410 Base excision repair
PF3D7_0218000
03420 Nucleotide excision repair
PF3D7_0218000
03430 Mismatch repair
PF3D7_0218000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfa03032
]
PF3D7_0218000
03036 Chromosome and associated proteins [BR:
pfa03036
]
PF3D7_0218000
03400 DNA repair and recombination proteins [BR:
pfa03400
]
PF3D7_0218000
DNA replication proteins [BR:
pfa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PF3D7_0218000
DNA Replication Termination Factors
ELG1-RFC complex
PF3D7_0218000
Chromosome and associated proteins [BR:
pfa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PF3D7_0218000
DNA repair and recombination proteins [BR:
pfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PF3D7_0218000
Check point factors
HRAD17(Rad24)-RFC complex
PF3D7_0218000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_30
AAA_19
RuvB_N
AAA_22
DUF2247
SLFN-g3_helicase
AAA_11
DEAD
AAA_23
AAA_14
nSTAND3
AAA_16
AAA_28
AAA_assoc_2
KTI12
RNA_helicase
bpMoxR
FtsK_SpoIIIE
Viral_helicase1
AAA_5
PIF1
AAA_18
ResIII
AAA_7
TIP49_C
DUF815
MeaB
Mg_chelatase
AAA_24
RsgA_GTPase
SNF2-rel_dom
T2SSE
AAA_2
VapE-like_dom
TniB
AAA_33
Motif
Other DBs
NCBI-GeneID:
812767
NCBI-ProteinID:
XP_001349685
PlasmoDB:
PF3D7_0218000
UniProt:
O96260
LinkDB
All DBs
Position
2:738860..739852
Genome browser
AA seq
330 aa
AA seq
DB search
MENIPWVEKYRPKRLDDIVHQNNAVMMLKEVVRTKNMPHLIFHGPPGTGKTSAINALAHE
LFGKENISERVLELNASDDRGINVVREKIKAYTRISISKNKIHSETKEVLPSWKLVVLDE
ADMMTEDAQSALRRIIEIYSNVTRFILICNYIHKISDPIFSRCSCYRFQSIPINIKKEKL
LYICQNENIDIVDDALEKIIETTEGDLRRAVSILQLCSCINTKITLNSVLDVSGLPSDNI
VYKIIDACKMKDLKLVEKTVQDIIEDGFDVAYIFKSFNNYFVTNTEYEDSLKYQILLELS
RHDYRLHCGATQYIQLLSFASSVHSLLNSV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatattccgtgggttgaaaagtaccgaccaaaaaggttggatgacatcgttcat
caaaataatgctgtaatgatgttaaaggaagttgtgaggacaaagaatatgcctcattta
atatttcatggtcctcctggtacaggtaaaacatcagcaataaatgctttggctcatgaa
ttgtttggaaaggagaatataagtgagagggtattagaattgaatgcttctgatgataga
ggtataaatgtggtaagagaaaaaattaaagcatatacaagaataagcattagtaagaat
aaaatccatagcgaaacaaaagaggtattaccttcatggaaattggttgtattggatgaa
gctgatatgatgacagaagatgcacaatcagcattaagaagaataatagaaatatattct
aatgtaacaagatttatacttatatgtaattatattcataaaatatctgatccaattttt
agtagatgttcttgttataggtttcaatcaatacctattaatattaaaaaggaaaaatta
ctttatatatgtcaaaatgaaaatattgatatagtagacgatgctttagaaaaaattatt
gaaacaacggaaggtgatttaagaagagcagtttctatattacaattatgttcatgtatt
aatacgaaaattacattaaattctgttttagatgtatctggattaccatcagataatatc
gtatataaaattattgatgcatgtaaaatgaaagatttaaagcttgtggaaaaaacagta
caagatattattgaagatggttttgatgtagcttatatttttaaatcatttaataattat
tttgttacgaacacagaatatgaagattctttaaaatatcaaatattattagaactttcc
agacatgattatcgattacattgtggtgccacacaatacatacaacttttaagttttgct
tcatcggtacattcgttattaaatagtgtataa
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