Phascolarctobacterium faecium: PFJ30894_01271
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Entry
PFJ30894_01271 CDS
T05784
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pfac
Phascolarctobacterium faecium
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfac03019
]
PFJ30894_01271 (rnc)
03009 Ribosome biogenesis [BR:
pfac03009
]
PFJ30894_01271 (rnc)
03036 Chromosome and associated proteins [BR:
pfac03036
]
PFJ30894_01271 (rnc)
Enzymes [BR:
pfac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PFJ30894_01271 (rnc)
Messenger RNA biogenesis [BR:
pfac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PFJ30894_01271 (rnc)
Ribosome biogenesis [BR:
pfac03009
]
Eukaryotic type
90S particles
RNase
PFJ30894_01271 (rnc)
Prokaryotic type
rRNA processing factors
PFJ30894_01271 (rnc)
Chromosome and associated proteins [BR:
pfac03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PFJ30894_01271 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
BBG63638
LinkDB
All DBs
Position
1264862..1265590
Genome browser
AA seq
242 aa
AA seq
DB search
MQDTRKEQLLKFCQSLGIEMHKLELLNSALTHTSYAHESKELPRPEHNERVEFLGDSVLS
VIVSTYMYCTFPNLNEGELTKLRAHIVCEASLAEYARKINLGDYLLLGKGEGLSGGRERA
SILADAFESVLGAYYLDQGMEAARVFLLGLMKAELDFICTHGICSDFKTRLQEVAQQDGD
VDIVYELIGSKGPEHNKHFATIVSVNGKHIGSGEGRTKKEAEQQAAKSALEKMGAPLTGF
PK
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacacgcgcaaagagcagctgctgaagttctgtcaaagccttggcatcgaaatg
cacaagctggaacttctaaacagcgctctgacgcatacatcatacgctcacgaatctaaa
gaattaccgcgtccggaacataacgaacgcgtagaatttttaggcgactccgtgctcagc
gttatcgtcagtacatatatgtactgcactttccccaaccttaacgaaggagaacttacc
aagctcagggcccatatcgtctgcgaagcatcgctggctgaatatgcccgtaaaataaat
cttggtgattacctgcttttaggaaagggagaaggtttgtcgggaggacgcgaacgcgct
tctatcctggccgacgcttttgaatctgtacttggggcttattatttagaccagggtatg
gaagcagcccgtgtatttttactggggttaatgaaagccgagctggattttatctgtacg
cacggcatttgcagtgattttaaaacaaggctgcaggaagttgcgcagcaggatggcgat
gttgatatcgtctatgagctgatcggttccaaaggtcctgaacacaacaaacattttgcc
accattgtttccgttaacggcaaacatatcggttcaggcgaaggcaggacgaaaaaggaa
gcggaacagcaggctgctaaaagcgctcttgaaaaaatgggcgcgcctttgacaggcttt
cctaaataa
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integrated database retrieval system