Phascolarctobacterium faecium: PFJ30894_02020
Help
Entry
PFJ30894_02020 CDS
T05784
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pfac
Phascolarctobacterium faecium
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfac03019
]
PFJ30894_02020 (yhaM)
Messenger RNA biogenesis [BR:
pfac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PFJ30894_02020 (yhaM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
HDOD
Cas3_HD
TraI_2
HD_3
Motif
Other DBs
NCBI-ProteinID:
BBG64362
LinkDB
All DBs
Position
complement(2064116..2065039)
Genome browser
AA seq
307 aa
AA seq
DB search
MISDFKAGTKVCQAVLLRVQKIGNSSNGGVFARGLLEDNSGKMPFIVFEAGIVDKMRSME
GPKVMMVGGMVDINKFSNDMTLQLVLQRMEEIMPEDDITHLLPNGDFDHQEYENKLQKLI
KGVMTPGIRLILENIFSGTLYDKFLINPAGMRLHHAYIGGLLQHSVDVAGIAQSLADRIG
GVDKDLIVAGALLHDIGKIREISSDIGFPYTMEGRLLGHVSMSAVMVQEAAGKAKVTGPK
LQQLLHIVLSHHGEQEKGSPVACATKESFIVHYADEIDAIMNQFSKNEGKNPWEYNKMLQ
RFLLHEA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgatcagtgattttaaggctggcactaaagtgtgtcaagctgtattgctgcgtgtgcag
aaaattggtaattcgtctaatggcggtgtgtttgcgcgcggtttactggaagataacagc
ggcaaaatgccgtttattgtttttgaagctggcattgtagataagatgaggtctatggaa
ggtcctaaagtaatgatggttggcggcatggtagatattaataaattttctaatgatatg
acgctgcagctggttttacaacggatggaagagattatgccagaagatgatattacccat
ttgctgcctaatggtgattttgatcatcaggaatatgaaaataagctgcaaaaacttatc
aaaggagttatgaccccgggaataagattgattttggaaaatattttcagcgggacttta
tatgataaatttttgatcaatccggcgggaatgcgtttacatcatgcttatatcggaggt
ttgcttcagcattctgttgatgttgccggtattgctcagtcgttggcagatcgtattggt
ggcgtggataaggatttgatcgttgcaggagcattgctgcatgatattggcaagattaga
gaaatttcttcggatataggatttccatatacgatggaaggaagattgctggggcatgtg
tctatgtcggcggtgatggtgcaggaggcagctggcaaggcaaaagtaacaggacctaag
ctgcagcagctgttgcatattgttttatcacaccatggtgaacaggaaaaaggttcgccg
gttgcatgtgcaacgaaagaaagctttattgtgcattatgctgatgaaattgatgcgatt
atgaatcagttcagtaaaaatgaaggaaaaaatccttgggaatacaataaaatgctgcag
cgttttttattgcatgaagcttga
DBGET
integrated database retrieval system
