Phascolarctobacterium faecium: PFJ30894_02277
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Entry
PFJ30894_02277 CDS
T05784
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfac
Phascolarctobacterium faecium
Pathway
pfac03420
Nucleotide excision repair
pfac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PFJ30894_02277 (pcrA_2)
03430 Mismatch repair
PFJ30894_02277 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfac03400
]
PFJ30894_02277 (pcrA_2)
Enzymes [BR:
pfac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PFJ30894_02277 (pcrA_2)
DNA repair and recombination proteins [BR:
pfac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PFJ30894_02277 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
PFJ30894_02277 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_22
PcrA_UvrD_tudor
AAA_11
Legum_prodom
Motif
Other DBs
NCBI-ProteinID:
BBG64606
LinkDB
All DBs
Position
complement(2340608..2342761)
Genome browser
AA seq
717 aa
AA seq
DB search
MENILQGLNASQLEAVTSTEGFIRVIAGAGSGKTRALARRFAYLVNEIGILPGNILCVTF
TNKSANEMRQRIHNLTGDNDTGYISTFHSFCVSVLQEDSHALQYPKSFLVLDNSDIDSML
KIIYEERGLTLRNMTFSKARDMIEIRKLIKEPEYYLDMLNMSLDTLRQKYLTATEPSDII
FYGYLYQEKKCFGLDYNDLIKFTLYIFEQNEAVKIKWQQRLEYIMIDEFQDIDELQYKLM
SVLCGYHKNLFIVGDPDQTIYTWRGANVRYLLDFDKIFPSVKTIMMMQNYRSTPQIVSVV
NDLIDKNKFRIKKNLMPTIADGRKVICHHADTSEREAMWIAEQIQALHGERTSYREITVL
YRAHYITRIVEEVFLREKIPYAIYSGVQFFNRMEIKDALAYLRLIAYKDDLAFLRVVNVP
KRNLGERRIKFLQEYAVKHQCSLYISLETNLDNEIFKGTKAAQFVALIENFAANYAERQI
SELLAAILNESGYEKMLRTEGSQERLDNLAELKQSVYEYETSCGEESTLEHYLSHIALFT
NSDAADNSDKVKLMTVHSAKGLEFPYVFLCAMNEGVFPSKKTDTIQKMEEERRLAFVAMT
RAQKGLYLSEAEGRNFDGSPRYPSRFLLDIEPALLDYTQKPQEGLIRETKDYLVINERYL
ADEENQSSLAVGQRVKHSIFGSGTVVDVDLIKAAHLVKFDNIDTPRSISFRAKLEKD
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaatatactgcagggacttaatgcgtctcagcttgaagctgttacttctacggaa
ggatttatacgtgttatagccggagcagggtcaggtaaaacaagggctctggctcggcgt
tttgcctatctggtcaatgaaatcggaattttgccggggaatattctatgtgtaactttt
actaataaatcggcgaatgaaatgcgtcagcgaatccataacctgactggtgataatgat
actggttatatcagtactttccatagtttctgcgtatctgttttacaggaggacagccat
gctctgcaatatccaaaaagctttcttgttttagacaattctgatatcgattctatgctg
aaaattatttacgaggaacgtggattgacgcttagaaatatgactttcagtaaagcacgg
gatatgattgaaatcagaaaactaattaaagaaccggaatattatctggatatgctcaat
atgtcattagatacattgagacagaaatatcttactgcaacagagccgtctgatataatt
ttttatggttatttatatcaggagaaaaaatgcttcggactagattataatgatttaatt
aaatttaccttatatattttcgaacaaaatgaagctgttaaaataaaatggcagcaacgt
ttggaatatatcatgattgatgaatttcaggatattgatgaactgcagtacaaattgatg
tcagtattgtgtggttaccataaaaatctgtttatcgtcggggatccagaccagacgatt
tatacctggcgcggtgctaatgtgcgctatttactggattttgataagatttttccaagt
gtaaaaactataatgatgatgcagaattatcgctctacaccgcagatagtttcggtcgtt
aatgatttgattgataaaaataagtttaggatcaagaaaaatcttatgccaactattgca
gacggaaggaaggttatatgccatcatgcagatacttctgagcgtgaagcgatgtggata
gcagagcagatccaggcattgcatggcgagaggacttcttacagggaaatcactgtttta
tatcgtgcgcattatattaccagaatcgtagaggaagtttttttacgtgaaaaaatacct
tacgctatttacagcggggtgcagtttttcaacagaatggaaataaaggacgctttggca
tatttacggttgattgcatataaagatgatctggcgtttttaagagtagttaatgttcct
aaaagaaatcttggggagcggcgcataaaatttttgcaggaatatgcagtcaagcaccaa
tgctcgctgtatatttctttagagacaaatttggataatgaaatttttaaagggacaaaa
gccgcacagtttgtagcattgatcgaaaattttgccgctaattatgcagaaagacaaatt
tcggaattgctggctgcaattttaaatgagagtggttatgaaaaaatgctgcggacagaa
ggaagtcaggaacgtctggataatctggcggaacttaaacagtcggtttatgaatatgaa
acttcctgcggggaagaaagtactttagaacattacttgtcacatattgctttgtttact
aacagcgatgcggctgataatagtgataaagtaaaattaatgacggtacattcggccaaa
ggtctggaatttccctatgtatttttatgtgcgatgaatgagggtgttttcccgtctaag
aaaacagatactatacaaaagatggaggaagagcgcagactcgcttttgttgcaatgacc
cgtgcacagaaagggctgtatctttctgaagctgaaggtagaaattttgatggctctccg
cgctatccgtcgcgttttctgctggatatagagccggcattgcttgattatacacaaaag
ccgcaggaaggtttgataagagaaacaaaagattatcttgttatcaacgagcgttatctt
gctgatgaagaaaatcagtcgtcgctggctgtcgggcagcgtgtaaagcatagtattttc
ggttctggtactgttgttgatgtagatttgatcaaggccgcgcatcttgtgaaatttgac
aatattgatacgccgcgcagtatttctttcagggcaaaattagaaaaggactag
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