Planococcus faecalis: AJGP001_06440
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Entry
AJGP001_06440 CDS
T04955
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pfae
Planococcus faecalis
Brite
KEGG Orthology (KO) [BR:
pfae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfae03016
]
AJGP001_06440
Enzymes [BR:
pfae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AJGP001_06440
Transfer RNA biogenesis [BR:
pfae03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AJGP001_06440
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
AQU78914
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All DBs
Position
1281972..1282499
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AA seq
175 aa
AA seq
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MKPHYFVGIKIPQNIAENLVAERDSWKLKSHKRQTPAQDMHITLLFIGEDVNGEIDQIEK
LLARTNQQPFKLTVNGIKTFGNPVTPRIIYASLESCEELNVLQRQIVHTLDSLQMSPNLK
EFVPHITLASKWAGGVPAEPQFSIDQMQFEVTEFSLFRIAMKEIPRYQKIFDYRL
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacattactttgtgggcataaaaattccacagaacattgcagagaacttagtt
gcagaacgagacagttggaagttgaaaagtcataaaaggcaaaccccagctcaagatatg
catattaccttactgtttattggcgaagatgtgaatggcgaaatagatcaaattgaaaaa
ctactagccagaaccaatcagcagccatttaaactaacagtgaatggcattaagactttc
ggtaacccggtaactccacgtataatttatgcctctcttgaaagttgtgaagaattaaat
gtgcttcagcgacaaattgtccatactttggattcgctacagatgagtcccaacctgaaa
gaattcgtgccgcatatcacattggctagtaaatgggcaggaggcgtgcctgcagaaccg
caattttcaattgatcagatgcaatttgaagtgacggagttttcactgttccgaattgca
atgaaagaaataccacgttatcaaaagatcttcgattatcggctttaa
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