Pseudomonas synxantha LBUM223: VO64_2289
Help
Entry
VO64_2289 CDS
T03769
Name
(GenBank) Penicillin-binding protein 2 (PBP-2)
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb00550
Peptidoglycan biosynthesis
pfb01100
Metabolic pathways
pfb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VO64_2289
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VO64_2289
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfb01011
]
VO64_2289
Enzymes [BR:
pfb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VO64_2289
Peptidoglycan biosynthesis and degradation proteins [BR:
pfb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VO64_2289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AKA82835
LinkDB
All DBs
Position
complement(2575495..2577393)
Genome browser
AA seq
632 aa
AA seq
DB search
MTQPIRIKDHEKDARLVRARVVFGAILVVALMGVLIARLYFLQVIQYDYHSTLSENNRVH
VQPIPPTRGLIFDRNGVVVADNRPSFSLSMTRERSGDWQQVLDVIVEVLQLTPEDRVIFE
KRMKQGRRPFEPVPILFELTEEQIARIAVNQFRLPGVEVVAQLVRHYPQGPHFAHSVGYM
GRINEKELKTLDPVNYSGTHHIGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTD
PIPGKDIVLSLDIKLQEAAEMALGGRRGAVVALDPKTGEVLAMVSQPSFDPNLFVTGISF
KAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVTASSRVYDPGYYMLPNY
DHKYRNWNRSGDGYVDLDTAIMRSNDTYFYDLAHKLGIDRLSAYMGKFGLGQKVSLDMFE
ESPGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALVANKGIWNRPHL
AKTIEGEKPVDENPIPDIVLRDPSDWAKVNHGMQQVMHGARGTARKAAAGAQYRIAGKSG
TAQVVAIKQGEKYDRSKVQERHRDHALFVGFAPAEDPKIVVAVMVENGESGSGVAAPVVR
QIMDAWLLAADGKLKPEYGGPPSSPEVTAREE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgacccagccgatccgcatcaaggaccacgagaaagacgcacgtctggtacgcgcgcgg
gtggtgttcggtgccatcctggtggtggcgttgatgggcgtgctgattgcgcggctgtat
ttcctccaggtgatccagtacgactatcactccacgctgtcggaaaacaaccgggtgcat
gtgcagccgattccaccgacccgcgggctgatcttcgaccgcaatggcgtggtggtcgcg
gataaccgccccagcttcagcctgagcatgacccgcgagcgttccggcgactggcagcag
gtgctcgatgtgatcgtcgaggtactgcaactgacgccggaagaccgggtgatcttcgag
aaacgcatgaagcaggggcgccggccgttcgagccggtgccgatcctgttcgagctgacc
gaagagcagatcgcccgcattgcggtgaaccagttccgcctgcctggtgtggaagtggtg
gcacagttggtgcgccactatccacaaggcccgcactttgcccactcggtcggctacatg
gggcggatcaacgagaaagagctcaaaaccctcgatccggtcaattacagcggcacccat
catatcggcaagaccggcatcgagcgtttctacgagcccgaactgcacggccaggtgggt
tacgaagaagtcgagaccaatgcccgtggccgtgtattgcgcgtgctcaagcgtaccgac
ccgatcccgggcaaggacatcgtgctgagcctggacatcaagctgcaggaagcggccgag
atggccctgggtggccggcgtggtgcggtcgtggccctggacccgaagaccggcgaagta
ctggcgatggtcagccagccgagtttcgaccctaacctgttcgtcaccgggatcagtttc
aaggcctatgccgagctgcgcgattccattgaccggccgctgttcaaccgggtgctgcgc
ggcctgtatccgccaggttcgaccatcaagccggcggtggcgattgccggcctggattcc
ggcgtggtcacggcctccagccgcgtctatgaccccggctactacatgctgcccaactac
gaccacaaataccgtaactggaaccgctccggtgacggctatgtcgacctggacaccgcg
atcatgcgctccaacgacacctacttctacgacctggcccataagcttgggattgatcgc
ctgtctgcctacatgggcaagttcggcctcggtcagaaagtctccctggacatgttcgaa
gaatctcccggcctgatgccgtcgcgtgagtggaagcgtgcgacccgccgccaggcatgg
ttcccgggtgaaaccctgatcctcgggatcggccagggctatatgcaggccacgccgctg
caactggcccaggccacggcactggtggcgaacaagggcatctggaaccgtccgcacctg
gccaagaccatcgaaggcgaaaagccagtggatgaaaacccgatccccgacattgtgctg
cgcgacccgtccgactgggccaaggtcaaccatggcatgcagcaagtgatgcacggcgcc
cgtggcaccgcacgcaaggcggcggccggcgcgcaataccgcatcgccggcaagagtggt
acggcccaggtggtcgcgatcaagcagggcgagaaatatgaccgctccaaggttcaggag
cgccaccgcgaccacgctttgtttgtcggctttgccccggccgaggacccgaagatcgtg
gtggcggtgatggtcgagaacggtgagtccggctccggcgtcgccgcacctgtggtgcgc
cagatcatggacgcctggctgctggccgccgatggcaagctcaagcccgaatatggcggc
cccccttcaagtcccgaggttacggcccgtgaagagtaa
DBGET
integrated database retrieval system