Pseudomonas synxantha LBUM223: VO64_5210
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Entry
VO64_5210 CDS
T03769
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfb03009
]
VO64_5210
Ribosome biogenesis [BR:
pfb03009
]
Prokaryotic type
ribosomal protein modification factors
VO64_5210
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
Rapsyn_N
Motif
Other DBs
NCBI-ProteinID:
AKA85756
LinkDB
All DBs
Position
complement(5800628..5801845)
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AA seq
405 aa
AA seq
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MQRLSSSLRRRSAEETLSIITNELAPRLGITRVTDTTWLDRIGIPVFASIRPDALKGSLC
VNAGKGLRPAEAKIGAYMEAIEFSLAQYNTAQLTLVESTPRQLIDSHEGRIAFNQFCMLY
GFSANADALIMAIEVEDVLREKKVLAPAELVFIPYPENPGQQLFGESSSGLASGNDLVEA
SVHAMCELMERDVQAFNHLHDRSCLVHLDQYSAEIAALISKVNDAGLSLSVRYTENCFGL
AYFQAFIMEESPQAPISVATGSGLHPIKEIALIRAICEAAQSRLSHIHGGRDDIIERVKY
FEKKGRSVELEAISRLRNVATSREQMIDYSAIDCQEAAIPTIEAAWTLLIERLQAIGLSS
VLRVVLSKATDDITVVRIMIPGLEAFEPGLKRVGPRLLTYVKQSA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaggcttagttcgagccttcgtcgtcgcagtgccgaagaaacattatccatcatc
accaacgaacttgccccacgcctgggcattacccgagtaaccgacacaacctggctggac
cgtatcggcatcccagtgtttgccagtattcgacccgatgccctcaagggctcgctgtgc
gtcaatgcaggtaaaggcctcaggccagccgaagccaagataggcgcgtacatggaggct
atcgaattcagccttgcgcaatacaatacggcccaactgacactggtggagagcactcct
cggcaactcatcgacagccatgagggccgcatagcgttcaatcagttctgcatgctgtat
ggcttctctgccaatgccgacgcgctcatcatggccatcgaagtcgaagacgtattgcgc
gagaaaaaggtccttgcacccgccgaactggtgttcattccctaccccgagaacccaggg
caacaactctttggagaaagctccagtggcctggcctccggcaatgacttggtggaagcc
tcggtgcatgcgatgtgcgaactgatggagcgcgatgtccaggccttcaatcacctgcat
gaccgttcctgcctcgtccatctggaccagtacagcgcagagatcgctgccctgatcagc
aaggtcaatgacgccggcctgagcctgtcggtccgctacaccgagaactgctttggactg
gcctacttccaggcgttcatcatggaagagtccccccaggcccccatctctgtggcgact
ggctcagggctgcatccgatcaaggaaatcgccttgatccgggcaatctgcgaagcggcc
caaagccgtctgagtcacatccacggtggccgggacgacatcattgagcgggtcaaatac
ttcgagaagaaaggccgctccgtggagcttgaagcgatctcacgcttgcgtaacgtggcg
acctcccgtgaacagatgatcgattactccgccatcgactgccaggaagccgcgatcccc
accatcgaagcggcctggacgttgcttatcgagcggttgcaggccatcggcctgagtagc
gtgctgagggtcgtgcttagcaaggccacggacgacatcacggtggtcagaatcatgatt
ccggggcttgaagcctttgaacccgggttgaaaagggtcggtccgaggttacttacgtat
gtcaaacaaagcgcttga
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