Pseudomonas fluorescens A506: PflA506_1260
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Entry
PflA506_1260 CDS
T02114
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pfc
Pseudomonas fluorescens A506
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfc03016
]
PflA506_1260 (truD)
Enzymes [BR:
pfc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PflA506_1260 (truD)
Transfer RNA biogenesis [BR:
pfc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PflA506_1260 (truD)
Prokaryotic type
PflA506_1260 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AFJ56998
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All DBs
Position
1423719..1424777
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AA seq
352 aa
AA seq
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MNDLQLLGPRAYGEALGSAVLKATAEDFQVDEVLDIPLTGDGEHLWLWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDMSGAENDTLKILKTARHKR
KLQRGAHSANGFTLRLTQLVGDTAAIDARLQLIARHGIPNYFGTQRFGHNGGNVADAREW
AARKALPEQRNVRSRLLSTARSYLFNQVLAARVADGSWQRAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGDSPAKGLTYELEQSVAAGEADLRDWLVKAGMSQERRI
LRLPIGGLTWHYPGPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctgcaactgctgggcccgagggcctatggcgaggccctgggcagcgcggta
ctcaaggccacagccgaagacttccaggttgatgaggtgctggacatcccgctgaccggc
gacggcgagcacctgtggctgtgggtggaaaagcgcggcttgaacactgaggaagcggca
cggcgtatcgccaaggctgctggggtgccattgcgcaccgtcagctatgccgggctcaag
gaccgtcaggccctgacccgccagtggttcagcgtgcaattgcccggcaaggccgacccg
gacatgagcggcgcagaaaacgacaccctcaagatcctgaaaaccgcccgtcacaaacgc
aagttgcagcgtggggctcattcggccaacggcttcaccttgcgcctgacccaactggtc
ggcgacaccgctgccatcgacgcacgtctgcagttgattgcccggcacggcatccccaat
tatttcggcacccagcgttttggccacaacggcggcaatgtggcggatgctcgcgagtgg
gctgcccgcaaggccctgcccgagcagcgcaacgtgcgctcgcgcttgctgtccaccgct
cgcagttacctgttcaaccaagtgttggcggctcgtgtcgccgacggttcatggcagcga
gcccaagttggcgatctgctggcgtttaccgacagtcgcagtttttttccggccggggaa
gctgagtgcagtgacccgcgcctggcgattctggacctgcatcccaccggcccgcagtgg
ggcgagggcgattcaccggcgaaaggtcttacatacgagctggaacaatctgtcgccgct
ggcgaagctgacctacgtgattggctggtgaaggcgggaatgagccaggaacgtcgcatt
ctgcgactgcccattggcgggttgacgtggcattatcccgggcctgacattctgcaattg
gaattcgtcctgccggccggatgcttcgccactgtcttggtgcgcgagcttgttgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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