Pseudomonas fluorescens A506: PflA506_1400
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Entry
PflA506_1400 CDS
T02114
Symbol
algU
Name
(GenBank) RNA polymerase sigma factor AlgU
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pfc
Pseudomonas fluorescens A506
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfc03021
]
PflA506_1400 (algU)
Transcription machinery [BR:
pfc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PflA506_1400 (algU)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
AFJ57354
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All DBs
Position
1569967..1570548
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AA seq
193 aa
AA seq
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MLTQEEDQQLVERVQRGDKRAFDLLVLKYQHKILGLIVRFVHDTHEAQDVAQEAFIKAYR
ALGNFRGDSAFYTWLYRIAINTAKNYLVSRGRRPPDSDVSSEDAEFYDGDHGLKDLESPE
RALLRDEIEGTVHRTIQQLPEDLRTALTLREFDGLSYEDIASVMQCPVGTVRSRIFRARE
AIDKALQPLLQEN
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgctaacccaggaagaggatcagcagctggtcgagcgcgtacagcgcggtgataagcga
gcatttgatctgctagtgctgaaataccagcacaaaattctcgggttgatcgtgcggttt
gtgcacgacacccatgaagcgcaggacgttgcacaggaagcctttatcaaggcttaccgt
gcacttggaaatttccgcggtgacagtgcgttttatacgtggctgtaccgcatcgccatt
aacacggcgaaaaactatctggtgtcacgcggtcgccgcccaccagacagtgatgtcagt
tcagaagatgcagaattttacgatggtgatcacggcctcaaagatctcgagtcgccggag
cgtgcattgctgcgcgacgagatcgaaggcaccgttcatcgcactattcagcaactgcca
gaagatttgcgtacggcgttaactttacgtgaattcgatggtctgagttacgaagacatt
gcgagcgtcatgcaatgtccggtggggactgtgaggtcacggattttccgggcccgagaa
gccatcgacaaagccttgcaaccgttgttgcaggaaaactaa
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