Pseudomonas fluorescens A506: PflA506_5302
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Entry
PflA506_5302 CDS
T02114
Symbol
tssC1
Name
(GenBank) type VI secretion protein TssC1
KO
K11900
type VI secretion system protein ImpC
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PflA506_5302 (tssC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfc02044
]
PflA506_5302 (tssC1)
Secretion system [BR:
pfc02044
]
Type VI secretion system
Imp/Vas secretion system core components
PflA506_5302 (tssC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
BMFP
TssC
Motif
Other DBs
NCBI-ProteinID:
AFJ56203
LinkDB
All DBs
Position
5804203..5805699
Genome browser
AA seq
498 aa
AA seq
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MTDNTAREGSQILGTTEEASEFANLLLQEFKPKTERAREAVETAVRTLAEQALAQTDLVS
NDAIKSIESIIAAIDAKLTAQVNQIIHHQDFQQLESAWRGLHYLVNNTESDEQLKIRVLN
ISKPDLHKTLKKFKGTAWDQSPIFKKMYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLG
ELSKVCAAMHSPFIAAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYI
GLTMPRFLARLPYGAKTDPVEAFAFEENTDGADSSKYTWANAAYAMAVNINRSFKHYGWC
SRIRGIESGGEVENLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTD
FAAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKVGSFKEKDE
MQRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVIVEEVEGNPGYYNSKFYLRPHYQLE
GLTVSLRLVSKLPSAKSA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaataccgcccgcgaaggcagccagatcctgggtaccaccgaagaagccagc
gagttcgcgaacctgctgctgcaagaattcaaacccaagaccgagcgtgcccgcgaagcc
gttgaaaccgcggtgcgcaccctggctgaacaggccctggcgcaaaccgacctggtgtcc
aacgacgcgatcaagtcgatcgaatcgatcatcgccgccatcgacgccaagctcaccgcc
caggtcaaccagatcatccaccaccaggatttccaacaactggaaagcgcctggcgtggc
ctgcattacctggtcaataacaccgagagcgatgagcaactgaagattcgcgtgctcaac
atctccaagccagacctgcacaagaccctgaagaaattcaagggcaccgcgtgggaccag
agcccgatcttcaagaagatgtacgaagaagaatacggccagttcggtggcgaaccttac
ggctgcctggtgggtgactactacttcgaccagtcgccgcccgacgtggaactgctgggc
gagctgtcaaaagtctgcgccgccatgcactcgcctttcatcgctgcggcctcgccgacc
gtgatgggcatgggttcgtggcaggaactgtcgaacccacgcgacctgaccaagatcttc
accaccccggaatacgccggctggcgctcgctgcgtgaatcggaagactcgcgctacatc
ggcctgaccatgccgcgcttcctggcacgcctgccgtacggcgccaagaccgacccggta
gaagccttcgccttcgaagaaaacaccgacggcgccgacagctccaagtacacctgggcc
aacgccgcctacgccatggcagtgaacatcaaccgttcgttcaagcactacggctggtgc
tcgcgcatccgcggtatcgagtctggtggtgaagtggaaaacctgccggcccacacgttc
cctaccgatgacggtggcgtggacatgaagtgcccgaccgaaatcgccatcagtgaccgc
cgtgaagcggaactggcgaagaacggtttcatgccgctgctgcacaagaaaaacaccgac
ttcgccgcgttcattggcgcccagtcgctgcaaaagcctgccgaatacgacgacccggac
gccaccgccaacgccaacctggccgcacgcctgccgtacctgttcgccacctgccgtttc
gcccactacttgaagtgcatcgtgcgcgacaaggtcggctccttcaaagagaaggacgaa
atgcagcgctggttgcaggactggatcctcaactacgtcgacggcgacccggcgcactcc
accgaaaccaccaaggcccagcatccgttggcggcggccgaagtgatcgtggaagaagtc
gaaggcaacccggggtattacaactccaagttctacctgcgcccgcactatcagcttgaa
gggctgacggtgtcgttgcgcctggtatcgaaactgccttcggcaaaaagcgcataa
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