Pseudomonas ogarae: PSF113_1911
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Entry
PSF113_1911 CDS
T01734
Name
(GenBank) Pseudouridylate synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pfe
Pseudomonas ogarae
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfe03016
]
PSF113_1911
Enzymes [BR:
pfe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PSF113_1911
Transfer RNA biogenesis [BR:
pfe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSF113_1911
Prokaryotic type
PSF113_1911
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AEV61926
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All DBs
Position
2243013..2243867
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AA seq
284 aa
AA seq
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MANIDNPAAEMAADGFFRIALGVEYKGSRYRGWQRQASGVLTVQETLENALSKVADSPVS
LHCAGRTDAGVHACGQVVHFDTQVERSMKAWVMGANINLPHDVSVSWAKVMPAHFHARFK
AIARRYRYVIYNDQIRPAHLNEEITWNHRPLDVERMAEAAQYLVGVHDFSAFRAGQCQAK
SPIKELHHLRVTRHGKMIVLDIRASAFLHHMVRNIAGVLMTIGAGERPVEWIKEVLDSRV
RRSGGVTAHPFGLYLVQVEYRDEFELPERYIGPHFLTGFSELDG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaacatagacaacccggccgccgaaatggcggccgacggctttttccggatcgcc
ttgggcgttgaatacaaaggctcgcgctaccgtggctggcagcgccaggcgtccggcgta
ttgacggtgcaggaaacccttgaaaacgcgctgtccaaagtcgccgactcgcccgtttcg
ctgcattgcgccggccggaccgatgccggcgtgcatgcctgcggccaggtggtgcatttc
gacacccaggtcgagcgttcgatgaaggcctgggtgatgggcgccaacatcaacttgccc
cacgacgtcagcgtcagttgggccaaggtgatgccggcgcatttccatgcacgcttcaag
gccatcgcccggcggtatcgctacgtgatctacaacgatcagatccgtccggcgcacctg
aacgaagagatcacctggaatcaccgcccactggatgtcgagcgcatggccgaggccgcg
caatacctggtcggcgtccatgatttcagcgcctttcgtgccggccagtgccaggcgaag
tcgccgatcaaagagttgcatcacctgcgtgtgacccgtcacggcaagatgatcgtgctc
gatatccgcgccagcgcgttcctgcatcacatggtgcgcaacattgccggcgtgctgatg
accattggtgccggcgagcggccggtggaatggatcaaggaagtgctcgacagtcgtgtc
cgccgctccggtggcgtcacggcgcacccgtttggcttgtacctggtgcaggtcgagtat
cgcgatgagttcgagctgccggagcgttacatcgggccacatttcctcacgggcttctcg
gaactcgacggctga
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