Pseudomonas ogarae: PSF113_4354
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Entry
PSF113_4354 CDS
T01734
Name
(GenBank) polyamine abc transporter atp-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pfe
Pseudomonas ogarae
Pathway
pfe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSF113_4354
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfe02000
]
PSF113_4354
Transporters [BR:
pfe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PSF113_4354
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
SMC_N
ABC_ATPase
RsgA_GTPase
AAA_16
nSTAND1
AAA_25
AAA_22
AAA_29
nSTAND3
AAA
NACHT
Rad17
AAA_5
AAA_23
sCache_3_2
ATPase_2
NB-ARC
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AEV64350
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All DBs
Position
5074784..5075773
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AA seq
329 aa
AA seq
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MSYVSVQHLQKSYAGTPVFSDINCEIRKGEFVTLLGPSGCGKSTLLRCIAGLTAVDAGQI
ILDGQDIVPLSPQKRGIGMVFQSYALFPNMTVEQNVAFGLRMQKVDAADSRQRVLEILRL
VELHDFAARYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRQIQ
RELGLTTIFVTHDQEEALTMSDRIFLMNQGKIVQSGDAETLYTAPVDVFAAGFIGNYNLL
DADSATKLLQRPVSGRIAIRPEAIELSRNGEADALIRSHSLLGNVIRYRVEARGVELVVD
VLNRSAADLHPDGARLSLSIDPSALCEVA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgtcagcgtccaacacctgcaaaaaagctacgccggcacaccggtgttcagc
gacatcaattgcgagatccgcaagggcgaattcgtcaccctcctcggcccttccggttgc
ggcaaatccacgctgttgcgctgcattgccggcctgaccgcggtggatgccggccagatc
atcctcgatgggcaagacatcgtcccgttgagcccgcagaaacgcggcatcggcatggtc
ttccagagctacgccttgttccccaacatgaccgtggaacagaacgtcgccttcggcctg
cgcatgcaaaaagtcgacgccgcggacagccgtcagcgtgtgctggagatccttcgcctg
gtggagctgcatgattttgccgcgcgctacccccatcaactgtccggcggccaatgccag
cgcgtcgccctggcccgctccctggtgacccggccgcgcctgttgctgctggacgagccg
ctgtcggccctggatgcacggattcgcaagcacctgcgcgaacagatccgacagatccag
cgtgagttgggcctgaccacgatcttcgtcacacacgaccaggaagaagccctgaccatg
tctgaccggattttcctgatgaaccagggaaagatcgtacaaagcggcgatgccgaaacc
ctttacacagcgccagtcgacgtctttgccgccggtttcatcggcaactacaacctgctg
gacgccgacagcgcgaccaaactgctgcaacggccggtgagcggccgtatcgccatccgc
ccggaggccatcgagctgagccgcaacggcgaggccgatgcgctgatccgcagccacagc
ttgctgggcaacgtgattcgctaccgggtcgaggcccgtggcgtggaattggtggtggat
gtgctcaatcgttcggccgccgacctgcaccccgatggcgcacggttgtcactttccatc
gatccgtcggcgctgtgtgaggtagcctga
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