Pseudomonas ogarae: PSF113_5148
Help
Entry
PSF113_5148 CDS
T01734
Symbol
holA
Name
(GenBank) HolA
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pfe
Pseudomonas ogarae
Pathway
pfe03030
DNA replication
pfe03430
Mismatch repair
pfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSF113_5148 (holA)
03430 Mismatch repair
PSF113_5148 (holA)
03440 Homologous recombination
PSF113_5148 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfe03032
]
PSF113_5148 (holA)
03400 DNA repair and recombination proteins [BR:
pfe03400
]
PSF113_5148 (holA)
Enzymes [BR:
pfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSF113_5148 (holA)
DNA replication proteins [BR:
pfe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSF113_5148 (holA)
DNA repair and recombination proteins [BR:
pfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSF113_5148 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
CCCAP
Motif
Other DBs
NCBI-ProteinID:
AEV65127
LinkDB
All DBs
Position
5964076..5965113
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLGKHLQGALAPVYIISGDDPLLCQEAADAIRSAARQQGFDERQVFAADASFDW
GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALIEYCSRPAEDTVLLISLPKLDGSA
QKTKWGKALVEGPQTQFVQIWPVDVSQLPSWIRQRLSQAGLSASQDAVELIAARVEGNLL
AAAQEIEKLKLMAEGGQITVETVQAAVADSARFDVFGLTDAILNGEAAHALRMLEGLRGE
GVEPPVILWALARELRLLANLSLQYSQGVPLDKAFSQARPPVWDKRKPLMSKALQRYSAS
RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLSLLMAGQRLTLPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggcccccgctcaactcggcaaacacctgcaaggcgctctcgcgccggtctac
atcatcagtggcgatgacccgctgttgtgccaggaagccgccgacgccatccgctctgct
gcacgccagcagggcttcgacgaacgccaggtattcgccgccgacgccagtttcgactgg
ggcacgctgctgcaggccggggcgagcatgtcgttgttcgccgaaaaacgcctgctggag
ctgcgcttgccgtcgggcaaacccggtgacaagggcgccgctgcgctgatcgaatattgc
tcacggcccgccgaggacaccgtgctgctcatcagcttgccgaaactcgatggcagtgcg
caaaagaccaaatggggcaaggccctggtcgaaggcccgcagacccagttcgtgcagatc
tggccggtggatgtcagccagttgcccagctggatccgccagcgcctgtcccaggccggt
ctctcggccagccaggacgccgtggagctgattgccgcccgggtcgaaggcaacctgttg
gccgccgcccaggaaatcgaaaagctcaaactaatggccgaaggcgggcagatcaccgtg
gaaacggtgcaggctgccgtggccgacagcgcgcgcttcgatgtcttcgggctgaccgat
gcgatcctcaacggtgaagccgcccatgcgctgcgcatgctcgaaggcctgcggggcgaa
ggcgtcgagccgccggtgatcctctgggccctggcccgggaattgcgcctgctggccaac
ctgtccctgcaatacagccagggcgtaccgctggacaaagccttcagccaggcccgtcca
cccgtctgggacaagcgcaaaccgctgatgagcaaggccctgcaacgctattccgcatcg
cgctgggcgcaattgctgctcgaggcccagcgcatcgatgcgcagatcaagggccaggcc
gccggctcgccatggatgagcctcagtcgcttgtcgctgttgatggctgggcagcggttg
acgttgcctgctgaataa
DBGET
integrated database retrieval system
