KEGG   Pseudomonas fluorescens F113: PSF113_5310Help
Entry
PSF113_5310       CDS       T01734                                 

Gene name
tufB
Definition
(GenBank) TufB
  KO
K02358  elongation factor Tu
Organism
pfe  Pseudomonas fluorescens F113
Brite
KEGG Orthology (KO) [BR:pfe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:pfe03012]
    PSF113_5310 (tufB)
   03029 Mitochondrial biogenesis [BR:pfe03029]
    PSF113_5310 (tufB)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pfe04147]
    PSF113_5310 (tufB)
Translation factors [BR:pfe03012]
 Eukaryotic Type
  Elongation factors
   PSF113_5310 (tufB)
 Prokaryotic Type
   PSF113_5310 (tufB)
Mitochondrial biogenesis [BR:pfe03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    PSF113_5310 (tufB)
Exosome [BR:pfe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PSF113_5310 (tufB)
  Exosomal proteins of breast cancer cells
   PSF113_5310 (tufB)
  Exosomal proteins of colorectal cancer cells
   PSF113_5310 (tufB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID: AEV65290
UniProt: G8Q081
LinkDB All DBs
Position
complement(6146027..6147220)
Genome map
AA seq 397 aa AA seqDB search
MAKEKFERNKPHVNVGTIGHVDHGKTTLTAALTRVCSEVFGSAKVDFDKIDSAPEEKARG
ITINTAHVEYDSAVRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI
LLSRQVGVPYIVVFLNKADMVDDAELLELVEMEVRDLLSTYDFPGDDTPIIIGSALMALN
GQDDNEMGTTAVKKLVETLDSYIPEPERAIDKPFLMPIEDVFSISGRGTVVTGRVERGIV
RIQEEVEIVGLRDTQKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLVKPG
TVKPHTKFTAEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGNCELPEGVEMVMPGDNI
QMTVTLIKTIAMEDGLRFAIREGGRTVGAGVVAKVIE
NT seq 1194 nt NT seq  +upstreamnt  +downstreamnt
atggctaaggaaaagttcgaacgtaataagccgcacgtcaacgttggtaccattggtcac
gttgaccacggtaaaaccacgctgaccgctgctctgacccgtgtctgctccgaagttttc
ggttcggccaaggttgacttcgacaagatcgacagcgccccggaagagaaagctcgcggt
atcaccatcaacaccgctcacgttgaatacgattcggctgtgcgtcactacgcacacgtt
gactgcccaggtcacgccgactacgtaaaaaacatgatcaccggtgctgcccagatggac
ggcgcgatcctggtttgctcggccgctgatggtccgatgccacaaacccgtgagcacatc
ctgctgtcccgccaggtaggcgttccgtacatcgttgtcttcctgaacaaggctgacatg
gttgacgacgctgagctgctggaactggttgagatggaagtgcgcgacctgctgagcact
tacgatttcccaggtgatgacactccaatcatcatcggttcggctctgatggctctgaac
ggccaagacgacaacgaaatgggcaccactgctgtcaagaagctggtggaaactctggac
agctacatcccagagccagagcgtgctatcgacaagccgttcctgatgccaatcgaagac
gtattctcgatctccggtcgcggtactgttgtgactggtcgtgttgagcgtggcatcgtc
cgtatccaggaagaagttgagatcgtcggtctgcgcgatactcagaaaactacctgcact
ggcgttgaaatgttccgcaagctgctcgatgaaggtcgtgctggcgagaactgcggcgtg
ctgctgcgcggcaccaagcgtgacgatgttgagcgtggccaggttctggtcaagccaggc
accgtcaagccgcacaccaagttcaccgcagaagtttacgttctgagcaaggaagaaggc
ggtcgtcatactccgttcttcaaaggctaccgtccacagttctacttccgtacgactgac
gtgactggtaactgcgagctgccagaaggcgttgaaatggtaatgccaggtgacaacatt
cagatgactgttaccttgatcaagaccattgcgatggaagacggtctgcgtttcgctatc
cgtgaaggcggtcgtaccgtcggcgctggcgtcgtagccaaagtcatcgagtaa

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