Paludibaculum fermentans: IRI77_04020
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Entry
IRI77_04020 CDS
T06895
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pfer
Paludibaculum fermentans
Pathway
pfer01501
beta-Lactam resistance
pfer01503
Cationic antimicrobial peptide (CAMP) resistance
pfer02020
Two-component system
pfer03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IRI77_04020
09132 Signal transduction
02020 Two-component system
IRI77_04020
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IRI77_04020
01503 Cationic antimicrobial peptide (CAMP) resistance
IRI77_04020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfer02000
]
IRI77_04020
02044 Secretion system [BR:
pfer02044
]
IRI77_04020
01504 Antimicrobial resistance genes [BR:
pfer01504
]
IRI77_04020
Transporters [BR:
pfer02000
]
Other transporters
Pores ion channels [TC:
1
]
IRI77_04020
Secretion system [BR:
pfer02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
IRI77_04020
RTX toxin transporter
IRI77_04020
Multiple protein transporter
IRI77_04020
RaxAB-RaxC type I secretion system protein
IRI77_04020
Antimicrobial resistance genes [BR:
pfer01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
IRI77_04020
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
IRI77_04020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF3324
Motif
Other DBs
NCBI-ProteinID:
QOY89134
UniProt:
A0A7S7NSX7
LinkDB
All DBs
Position
complement(1014957..1016903)
Genome browser
AA seq
648 aa
AA seq
DB search
MNLIRPILAVFLSALMIAPASLAQAPQAPGTPASAGVKTDFSTFPTAKGPFFIRDYKQAV
VDPINLQNSSRLESLIKGGKIYLGLDDVIALALENNLDLELQRYTPQLAQADLLRAQAGG
LLRGVPTAVSSTSGSAQSQVTGGATGGTTATTASSSTTSSAGGAVITQTGTSIPNLDPSF
YFSSQFGHRSSPQSNTVTTGTTALISDSRYWSAGYQQSFLSGTTMSYGWNNTWFKSNNYR
SDINPGWNPNMTLQITQNLLQGWGLAVNNRNIRVAKNNIRLSDLTFKQQVMTTVAGVVNL
YWDLVSYSEDLKVKKKALEVAQKFYEDNKKQVEIGTLAPIEIVRAEANVAQAQQDLTNSE
TSLLQQETIVKSALSRTGVASPSLSEARIVPTDTLIQPTIDLAIDLKQLVETALRERPDV
AQTQINIDNTKIGLNGSRNALLPSLQVQATATNNGLAGPANTVPAPAGQDPVVHNVDPFF
QGGYSTALSQLFRRNFPDYSIAFSLNVPIRNRTAKADYVRDTLSLRQQEINAQRQINDIR
VNVQNAQIAVIQAKARYDSAVKARVLQQQTLDAENKKYALGASTAFLVVQTQRDLAQAQG
TEVSALAGYSRARVQLDLATAQILSKYKVEVSEARIGKSSRPITTPQN
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgatccgaccgattctcgccgtgttcctctcggcgctcatgattgcaccagcc
agcctggcccaggctccgcaggcgccgggaacgcccgcgtccgcgggtgtgaagaccgac
ttttcgacgtttccgacggccaagggtccgtttttcatccgcgactacaagcaggccgtt
gtcgaccctatcaacctgcagaactcgagccgcctggagtccctgatcaagggaggcaag
atttatctcgggctggacgatgtgatcgcactcgccctggagaacaacctggatctcgag
cttcagcgctatacgcctcagttggcgcaagcggatttgctgcgcgcccaggccggcggt
ctgttgcgcggtgttccgacagcggtcagcagcacctccggctccgcccagtcgcaggtg
accggcggcgcgaccggcggcaccaccgccacgaccgcgagttcgagcactacctccagc
gccggcggcgccgtgatcacacagaccggcacttcgattccgaatcttgacccgtcgttc
tatttctccagccagttcggccaccgctcctcaccgcagtcgaacacggtcaccaccggt
acgacggccctgatctcggactcccgctattggagcgccggttaccagcagtcgtttctg
tccggcaccacgatgagctacggctggaacaacacctggttcaagtccaacaactatcgc
agcgacatcaaccccggctggaaccccaatatgaccctgcagatcacgcaaaacctgctg
cagggatggggcctggcggtgaacaaccgcaacattcgtgtcgccaagaacaacatccgc
ctctcggatctcaccttcaaacagcaggtgatgaccaccgtcgcgggcgtggtgaacctc
tattgggacctggtgagctacagcgaggacctcaaggtgaagaagaaggcccttgaagtc
gcccagaagttctatgaggacaacaagaaacaggtagaaatcggcaccctggcgcccatc
gaaatcgtacgcgccgaggccaacgtcgcccaggcgcagcaggatctgacgaactcagag
acgtcgctgctgcagcaggagaccatcgtcaagagcgcgctcagccgcaccggcgtggcg
agccccagcctttccgaggcccgcattgtccccaccgacacgctgattcagccgaccatc
gacctggccatcgacctaaagcaactcgtcgagaccgcgcttagggagcggccggatgtg
gcccagacccagatcaacatcgacaacactaagattggtttgaacggcagccgcaacgcc
ctgctgccctcgctgcaggtgcaggccacggcgacgaacaatggcttagctggtcccgcc
aacacagtgcccgccccggcagggcaggaccccgttgtacacaatgtggatcccttcttc
cagggtggttacagcacagccctctcccagttgttccggcgcaactttcctgactattcc
atcgccttcagcttgaacgtacccatccggaaccgcacggccaaagccgactacgtccgc
gataccctctcgctacgccagcaggagatcaacgcccaacggcagatcaacgacatccgg
gtgaacgtccagaacgcccagatcgcggtcatccaggccaaggcccggtatgactcggcc
gtgaaggcgcgcgtcctgcagcagcagacgctggacgcggagaacaagaagtacgccctg
ggcgcctcgacggcgttcctggtggttcagacacaacgcgacctggcacaggcacagggc
accgaagtatccgcactggcgggctacagccgtgcgcgagtacaattggatctggcgact
gctcagatcctgagcaagtacaaggtggaagtgagcgaagcgcggatcggcaagagctcg
cggcccatcacaactccgcagaattag
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