KEGG   Paludibaculum fermentans: IRI77_08240
Entry
IRI77_08240       CDS       T06895                                 
Name
(GenBank) PBP1A family penicillin-binding protein
  KO
K05365  penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
Organism
pfer  Paludibaculum fermentans
Pathway
pfer00550  Peptidoglycan biosynthesis
pfer01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pfer00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    IRI77_08240
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:pfer01003]
    IRI77_08240
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pfer01011]
    IRI77_08240
Enzymes [BR:pfer01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     IRI77_08240
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     IRI77_08240
Glycosyltransferases [BR:pfer01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   IRI77_08240
Peptidoglycan biosynthesis and degradation proteins [BR:pfer01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   IRI77_08240
SSDB
Motif
Pfam: Transgly Transpeptidase UvrB_inter UB2H DUF2291 PPL4
Other DBs
NCBI-ProteinID: QOY89931
UniProt: A0A7S7SMX0
LinkDB
Position
complement(2074888..2077374)
AA seq 828 aa
MRIQVPRKALLVRFFLHPVGKSLLGISALALIVFVGAFSYYWVKYSRLIDQKLKEGPFTE
TAQLFATPEPIAVGDSLSADELVGALKRRGYTESRSNRLGWYHVRQDGVEIFPGVDAYIN
SEPGVVFLSGGTVTRIISNRDNTERQRYFLDPELITNLFDRKREKRRLVRYEDIPQILVH
AVISIEDKRFFEHSGFDPLRIIRTAWVDVTQNRRYGASTISMQTARNLWLTQDKTASRKA
AEILITLQIEQKLTKEQIFEFYSNQVDLGQHRSFAVHGFGEAAQVYFSKDIRELRLEEAA
LLAGLIQRPNYFNPYRHPERAMQRRNIVLKLMRENGFITDLQFIEASKAPVKVVEGGAES
TDAPYFVDLVNDDLQENFSDIDFQTSSYRIYTTLDMKLQRDAVEAVNIGMAEVDSLLSKR
KKKYPQAQVAMLVLDPHTAEIKALIGGRNYGASQLNRVLSKRQPGSAFKPFVYASVLSTT
LEGQNASVTPVTQVVDEPTTFFYDGQEYEPGNYHGAFYGLVNMRQALSKSMNIPTVKFAE
MAGYGNVANLARRAGMEGVRATPALALGSYEVTPLDIAGAYTIFSNGGVYTKQNLIKEVR
SSSGGLIHEYRPVRRGVLDPRVAYMVVNLMEEVLRSGTGAGARARGFGLPAAGKTGTSHD
AWFAGFTSKLLCIVWVGFDDNQELPLEGAQAALPIWTEFMKRGHRYREYRGVQQFEAPDG
IATVDIDPLSGQLATGACPNPRPEVFIAGTQPVDLCHLHGGGGRTQVASWDTPEPAAAAQ
APASSGSHSSSRPSRPKAEEPVADAKPAQPQPKPEKKGIGGWFRAIFK
NT seq 2487 nt   +upstreamnt  +downstreamnt
gtgcgtatacaggtcccccgcaaagccctcctcgtccgcttctttctacatcctgttgga
aaatcgctgctgggcatcagcgccctcgccctcatcgttttcgtcggcgctttcagctac
tactgggtgaagtactcgcggttgatcgaccagaagctgaaagaggggccgttcactgag
acggcgcagctgtttgccacgccggaaccgatcgcggtgggcgacagcctctccgcggac
gagctggtgggcgcgttgaagcggcgcggatacactgagtcgcgcagcaaccggctgggc
tggtatcacgtgcggcaggacggcgtggagatcttccccggcgtcgatgcgtacatcaac
agcgaaccgggcgtcgttttcctgagcggcggcacagtgacgcggattatctccaaccgg
gataacacggagcggcagcggtacttcctggatccggaactgatcaccaatctgttcgac
cgcaagcgggaaaagcggcggctggtgcgctacgaggacattccgcagatcctggtgcac
gcggtgatctcgatcgaggacaagcggtttttcgagcattccgggttcgatccgctgcgc
atcatccggacggcctgggtggatgtgacgcagaaccggcggtacggtgcgtcgaccatc
agcatgcagacggctcgcaatttgtggctgacgcaggacaagaccgcctccagaaaagcg
gccgagatcctgattacgctgcagattgagcagaagctgacgaaggaacagatcttcgag
ttctactcgaaccaggtggatctggggcagcaccgcagtttcgccgtccacgggtttggc
gaagcggcgcaggtctatttttccaaggacatccgggaactgcgcctggaagaggcggcg
ctgctggccgggctgatccagcgcccgaactacttcaatccttaccggcatcctgagcgg
gcgatgcagcggcggaacatcgtgctcaagctgatgcgggagaacgggttcatcaccgat
ctgcagttcatcgaggcgtccaaggctccggtgaaggtcgtggagggtggggcggaatcg
acggatgccccgtactttgtggacctggtgaacgacgacctgcaggagaacttctcggac
atcgatttccagacgagttcgtacaggatctatacaacgctggacatgaagttgcagcgg
gacgcggtcgaagccgtgaacatcgggatggccgaggtggacagcctgctgtcgaagcgg
aagaagaagtatccgcaggcgcaggtggccatgctggtgctggatccgcacacggcggag
atcaaggcactgatcggcgggcggaactacggagccagccagttgaatcgggtgttgtcg
aagcggcagccgggatcggcgttcaagccctttgtctacgcgagcgtgctgagcacgacg
ctggaagggcagaatgcgtcggtcacgccggtgacccaggtggtggatgagccgacgacg
ttcttctacgacgggcaggagtatgagcccggcaactatcacggagcgttctatggcctg
gtgaacatgcgccaggcactgtcgaagtcgatgaacattccgacggtgaagttcgccgag
atggccggatatggaaacgtggcgaacctggcgcgcagggcagggatggagggcgtccgg
gcgacgccggcgctggccctgggctcgtatgaagtgacgccgctggatattgccggtgcg
tatacgatcttctcgaacggcggcgtgtacaccaagcagaatctgatcaaggaagtccgc
agctcctcgggcgggctgatccacgaataccggccggtgcgtcgtggggtgttggatccg
cgtgtcgcctacatggtggtgaacctgatggaagaggtgctgcggtcgggcacgggcgcg
ggcgcacgggcacgcggcttcgggttgccggcggccggcaagacaggtacctcgcatgat
gcgtggtttgccggattcacctcgaaactgctttgtattgtgtgggttggcttcgacgac
aaccaggaactgccgctggaaggcgcgcaggcggcgctgcccatctggacggagttcatg
aagcgggggcaccgctaccgggagtaccggggcgtccagcagttcgaagctccggatgga
attgcgacggtggatatcgacccgttgagcggacagttggccacgggcgcctgcccgaat
ccgcggcccgaggtctttatcgccggcacgcaacccgtggatttgtgccatttgcacggc
ggcggcggccggacccaggtggccagttgggacactccggagccggcggcggccgcccag
gcacccgcttcttccgggtcgcactcctcatcccgcccgtcgaggcccaaagcggaagaa
cctgttgcagatgcaaaacctgcccagccgcaaccaaagcctgaaaagaagggtatcggc
ggctggtttcgggctatatttaagtag

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