Pseudomonas simiae PICF7: PFLUOLIPICF708275
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Entry
PFLUOLIPICF708275 CDS
T03767
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFLUOLIPICF708275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pff03021
]
PFLUOLIPICF708275
Transcription machinery [BR:
pff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFLUOLIPICF708275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
GerE
HTH_23
HTH_20
HTH_11
HTH_40
HTH_24
FkbO_Hyg5-like_N
RWP-RK
HTH_7
TnsD
Annexin
Trp_repressor
Motif
Other DBs
NCBI-ProteinID:
AJZ93531
LinkDB
All DBs
Position
complement(1815463..1815981)
Genome browser
AA seq
172 aa
AA seq
DB search
MSCPMSPSSHTAAVQNIYEQHHSWLHGWLKGKLHNACDAADVAHDTFVRILGGRHAAQIL
EPRDYLATIARGLVIDRYRRHAIEQAYKQTLAERPDATAISEEDKAIIIETLVAVDKALA
GLGERARRIFMLSQVEGLTYQQIADELQVSLTTVKKHMIRALTECSLIMASL
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatgccctatgtccccttcttcacacacggctgcggtccagaacatctacgagcag
caccattcctggttgcatgggtggctcaaaggcaagttgcataacgcctgcgatgcggcc
gatgtggcgcacgatacgttcgtgcgtatcttgggtgggcgacatgcagcgcagatcctt
gaaccacgtgactacctggcgaccatcgccaggggcctggtgattgatcgttaccgtcgg
catgccatcgagcaggcctacaagcaaaccttggccgaacggcctgacgccacggccatc
agtgaagaagacaaagccatcatcatcgagacactggtggccgttgataaagccttggcc
gggctcggcgagcgagctcggcggatcttcatgctgtcgcaggtcgagggcctgacttat
caacagatcgcggatgaactgcaggtgtcattgaccacggtgaagaagcacatgatccgt
gcattgactgaatgctcactgatcatggccagcctgtaa
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integrated database retrieval system
