Pseudomonas simiae PICF7: PFLUOLIPICF719635
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Entry
PFLUOLIPICF719635 CDS
T03767
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFLUOLIPICF719635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pff03400
]
PFLUOLIPICF719635
Enzymes [BR:
pff01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PFLUOLIPICF719635
DNA repair and recombination proteins [BR:
pff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PFLUOLIPICF719635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AJZ97285
LinkDB
All DBs
Position
complement(4202081..4202893)
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AA seq
270 aa
AA seq
DB search
MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLAEVQALGYHVYYHGQK
GHYGVALLSRQPALSLHKGFASDEEDAQRRFIWGTFADENGHPVTIMNGYFPQGESRDHP
TKFPAKQRFYEDLQQLLESQFSNDQALVVMGDINISPEDIDIGIGADNAKRWLKTGKCSF
LPEEREWMARLKNWGLVDSFRHLNPDVADRFSWFDYRSRGFEDEPKRGLRIDVILASNGL
LSRVKDAGVDYELRGLEKPSDHAPIWLELS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgtctccttcaatatcaacgggctgcgcgcccgccctcatcagctggcggcg
ctgattgaaaagcaccagcccgatgtgatcggcctgcaggaaaccaaggtccacgatgac
caattcccactcgccgaagtacaggcccttggctaccacgtgtactaccatggccaaaaa
ggtcactacggtgtcgccctgctctcgcgccagccggcgttgagcctgcacaaaggcttc
gccagtgacgaagaagatgcccagcgccgctttatctggggcaccttcgccgacgagaat
ggccacccggtcaccatcatgaacggttacttcccccagggcgaaagccgtgaccacccc
accaagttcccggccaagcagcgcttctacgaagacttgcagcaactgctggaaagccag
ttcagcaatgaccaggcactggtggtgatgggcgacatcaatatttccccggaagacatc
gacatcggcatcggcgccgacaacgccaagcgctggctgaagaccggcaagtgcagcttc
ctgccggaagagcgcgagtggatggcgcgcctgaagaactggggcctggtggacagcttc
cgccacctcaacccggacgttgccgatcgtttcagctggttcgactaccgcagccgtggg
tttgaagacgagcccaagcgcggcctgcgcatcgacgtgatcctggcctccaatggcctg
ctgtcgcgggtcaaggatgccggggtggactacgaactgcgggggctggaaaaaccgtcg
gaccatgcgccgatctggcttgaattgagctga
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