Pandoraea fibrosis: PI93_002630
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Entry
PI93_002630 CDS
T06385
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PI93_002630 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfib03400
]
PI93_002630 (mutM)
Enzymes [BR:
pfib01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PI93_002630 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PI93_002630 (mutM)
DNA repair and recombination proteins [BR:
pfib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PI93_002630 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
OrfB_Zn_ribbon
PSMbeta
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QHF11666
LinkDB
All DBs
Position
591809..592639
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVEVTRRGIAPHVAGTRIARIDVRNGALRWPVPDGLDTLLRGETLVGVTRRGKYL
LLEYAPGWLLVHLGMTGTLRVMPEPEALPTAGVHDHIDLVFERCALRYRDPRRFGAVLFH
PRSAGDVLLHPLLASLGVEPLTDDFDGNWLYAGTRGRTVAIKQALLAGSIVVGVGNIYAS
ESLFRAGIHPRMPAGKLSRPRADKLAKAVKDVLAAAIEKGGSTLRDFVGSDGKSGYFQQE
YFVYDRTGQPCRVCGTPIRQIVQGQRSTFFCPHCQK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactcccagaagtcgaagttacccgccgcggtattgcgccgcacgtggcgggc
acgcgtatcgcgcgtatcgacgtgcgcaacggcgcgttgcgctggccggtgcccgatggc
ctcgacacgctcctgcgtggtgaaacgctcgtcggtgtgactcgtcgcggcaagtatttg
ctgctcgagtacgcgcccggctggttgctcgtgcatctcggaatgacgggcaccctgcgc
gtgatgcccgaaccggaggcgcttcccaccgctggcgtgcatgaccacatcgacctggtg
ttcgagcggtgcgcgctgcgctatcgcgatcctcgccgtttcggcgcggtgctgttccat
ccgcgctcggccggcgatgtgctcctgcatccgctgctcgccagtctcggcgtggagccc
ctgacggacgacttcgacggcaactggctgtatgccggcacacgcggccgcacggtcgcc
atcaaacaggcgctgctcgcgggcagcattgtggtgggtgtgggtaacatttatgcgtcg
gagagtctctttcgcgccggtatccatccgcgcatgccggctggcaaactctcgcgtccg
cgtgcggacaagctcgcaaaagcggtcaaagacgtgctggccgccgccatcgagaagggc
ggcagcacattgcgcgacttcgtcggcagcgacggcaagagcggctatttccaacaggag
tattttgtctacgatcgcaccggacaaccgtgtcgggtgtgtggcacgccgatccgacag
atcgtgcagggccagcgctccacgttcttctgcccgcattgtcagaaataa
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