KEGG   Pseudocercospora fijiensis: MYCFIDRAFT_168670Help
Entry
MYCFIDRAFT_168670 CDS       T03109                                 

Definition
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pfj  Pseudocercospora fijiensis
Pathway
pfj03030  DNA replication
pfj03410  Base excision repair
pfj03420  Nucleotide excision repair
pfj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MYCFIDRAFT_168670
   03410 Base excision repair
    MYCFIDRAFT_168670
   03420 Nucleotide excision repair
    MYCFIDRAFT_168670
   03430 Mismatch repair
    MYCFIDRAFT_168670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfj03032]
    MYCFIDRAFT_168670
   03400 DNA repair and recombination proteins [BR:pfj03400]
    MYCFIDRAFT_168670
Enzymes [BR:pfj01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MYCFIDRAFT_168670
    6.5.1.6  DNA ligase (ATP or NAD+)
     MYCFIDRAFT_168670
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MYCFIDRAFT_168670
DNA replication proteins [BR:pfj03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    MYCFIDRAFT_168670
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     MYCFIDRAFT_168670
DNA repair and recombination proteins [BR:pfj03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MYCFIDRAFT_168670
   NER (nucleotide excision repair)
    Other NER factors
     MYCFIDRAFT_168670
   MMR (mismatch excision repair)
    Other MMR factors
     MYCFIDRAFT_168670
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-GeneID: 19332279
NCBI-ProteinID: XP_007931853
JGI: 168670
UniProt: M3AM10
LinkDB All DBs
Position
Unknown
AA seq 885 aa AA seqDB search
MSTPNKRRKKNDHQSPAQPVKSLDFFFGKQREREREREREREVAKPNGTTNHVNNEKKHV
KEPGEGLTDEALARTLQAQWDEEERRGQQNRGTANKREDGTTTVEPVTLRDASPPHDITS
NALAALGKKNTLSLQSATAEEDTVSHDIPFDESPLTFDPQTYIPDLKKQWAPEAGNSTYA
LLTHCFVLVNSTQSRIKIVDTLVNLLRTLIEGDPDSLLPAVWLATNSIAPPYVDIELGLG
GSAISKALKKVCGLDNSSLKTLYNKHGDAGDVAFEAKKKQSFTLRKPKPLTIKGVYDSLR
KIADAKGNGSQEVKQRIVERLVQDARGAEESRYIVRTLVQHLRIGAVKTTMLIALSRAFL
LSKPPSADYATKAAVDLRKLSKQELAEVWSPAEELVKACFARRPNYNDLVPTLLEVGIDQ
ELLVRCGLAMHIPLRPMLGGITRDLGEMLTRLQGRDFSCEFKYDGQRAQVHCDANGKVTI
FSRHLEVMTEKYPDLVALVPKIRGESVSSFILEGEVVAVDRETGDLKPFQILANRARKDV
VIQSVTVDVCLFAFDLMYLNGEELLDRPFRERRSLLRSLFVEIPNHFTWVKSMDATSEDG
EAVSDFFKQAIDIKCEGIMVKVLDNLPNPDLQTEMHVDVPAKPESAPVKGKKDKKSKKSI
STSKDTIGDDAAEEKKGGRRKALLSTYEPDKRLDSWLKVKKDYNTQTDTIDLIPVGAWHG
QGRKNAWWSPILLACRNPENGTLEVVTKCISGFTDAFYKANRARYDPDFEDEDGVLVGKN
TLSERPSYVEYAGTPDVWFEPQEVWEMIFADITLSPTYTAALGLVNEERGLSMRFPRFLK
VRGDKSIDEASTNEFLAALYRKQISKAPPKKAEEVEAEEELYDDG
NT seq 2658 nt NT seq  +upstreamnt  +downstreamnt
atgagcacgccgaacaagcggcgcaagaagaatgatcatcaatcgccagctcagcctgtg
aaaagcttggacttcttcttcggcaagcaacgggagagggagagggagagggagagggag
agggaggttgccaagccgaatggcactacgaatcatgtgaataacgagaagaagcatgtg
aaagagcccggagaaggattgactgatgaagcactggcgcggacacttcaggctcagtgg
gatgaagaagagcgacgaggccaacaaaatcgcggcactgccaataagcgagaggacgga
accaccacagtcgagccagtgactctgagagatgcctctccgccgcacgatatcacttcg
aatgctcttgcggctctcggcaagaagaacactctctcgttgcagtcggccacagccgaa
gaagacactgtctcgcacgatatcccattcgacgaatcgccgctcactttcgacccgcag
acgtatataccggacctcaagaagcaatgggcaccagaggctggcaattctacctatgcg
ctgctcacgcattgctttgtgttggtcaacagcacgcaatctcgcatcaagattgtcgac
actctcgtcaatctactacgcacgctgattgagggagatccagattcgttattgcctgca
gtctggcttgcgacaaactcgatcgccccgccatatgtcgatattgagcttgggctcggt
ggttcagcaatctcgaaagctttgaagaaagtatgcgggctagacaattcaagcctcaag
acactatataacaagcacggcgatgcgggcgacgtcgctttcgaggccaagaagaaacag
tccttcacgctacggaagccgaaaccgctgaccatcaaaggcgtgtacgacagcttgcgc
aaaattgcagatgccaaggggaacggcagtcaagaagtcaagcagaggattgtcgaacga
ttggtgcaagatgcaagaggtgccgaagaaagcagatacatcgtgcggacactggtgcag
catctgcgcattggagcagtgaagacgacgatgcttattgcattgtcaagagctttcctc
ctatcgaagccgccaagtgccgattatgcgaccaaggctgcggtagacctgcggaagctc
agcaagcaggagctggcagaagtctggtcgcctgcagaggagctcgtcaaagcttgcttt
gcgagaagaccaaattacaacgacctggtaccgacattgctcgaagtaggcatcgaccag
gagctgctcgtacgatgcggcttggcaatgcacatccctctacgacccatgttgggaggc
ataactcgcgacctgggagagatgttaaccagactacaagggcgagacttcagctgcgag
ttcaagtacgatggtcaacgggcgcaagtccattgcgacgccaatgggaaagtcaccatc
ttctcgcggcatctggaggtgatgacggaaaaatatcccgacttggttgcgctggtgccg
aagattcgtggagagagtgtgagtagtttcatcctcgaaggcgaagttgtggcagtcgat
cgggagactggcgatctcaagccgttccagatcttagcgaatcgtgcacgcaaggacgta
gtgatccagagtgtcaccgtagacgtctgtcttttcgctttcgatctcatgtacctgaac
ggcgaagagcttttggaccgaccattccgagaacgaagaagtctacttcgaagcctattt
gtggagatccccaaccattttacctgggtcaaaagcatggatgcgacttccgaagatggc
gaggccgtgagcgatttcttcaagcaggcgattgacatcaaatgtgagggcatcatggtg
aaggtgcttgacaacctgccgaaccctgatcttcaaactgagatgcatgttgatgttccg
gcgaaaccagaatctgcgccggtgaagggcaagaaggacaagaagtctaagaagtccatc
agcacctcaaaagatacgattggtgacgatgcggctgaagagaagaaaggagggcggaga
aaggcactgctctcgacgtatgaacccgacaagaggctggattcttggctcaaagtgaag
aaggactacaatactcagaccgacaccatagacttaataccagtcggagcttggcacggt
caaggccgaaagaacgcctggtggtcgccaatcctcctcgcatgcagaaatcccgagaac
ggcacgctcgaagtagtaaccaaatgcatcagcggctttacagatgctttctacaaagcg
aatcgagcgagatacgatcccgacttcgaagacgaggacggtgtcctagtcggaaagaac
actctctcggagcgacccagctatgtcgaatatgccggcacaccagacgtctggttcgag
ccgcaggaggtgtgggagatgatctttgcggacatcacgctttcgccgacgtatactgct
gctctcggacttgttaatgaggaaagaggactttcaatgcgattcccacggttcttgaaa
gttcgtggtgataagtcgattgatgaagctagcacgaatgagttcttggctgcgttgtat
cgtaagcagatttcgaaggcgccgccgaagaaggcagaggaggtagaggctgaagaggag
ttgtatgatgatggctga

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