KEGG   Pseudomonas frederiksbergensis: PFAS1_06990Help
Entry
PFAS1_06990       CDS       T04786                                 

Gene name
gatB
Definition
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
pfk  Pseudomonas frederiksbergensis
Pathway
pfk00970  Aminoacyl-tRNA biosynthesis
pfk01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    PFAS1_06990 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:pfk03029]
    PFAS1_06990 (gatB)
Enzymes [BR:pfk01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     PFAS1_06990 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     PFAS1_06990 (gatB)
Mitochondrial biogenesis [BR:pfk03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    PFAS1_06990 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey
Motif
Other DBs
NCBI-ProteinID: APV39101
UniProt: A0A1P8ES97
LinkDB All DBs
Position
1451029..1452474
Genome map
AA seq 481 aa AA seqDB search
MQWEVVIGLEIHTQLTTRSKIFSGSSTTFGSEPNTQASLVDLGMPGVLPVLNQEAVRMAV
MFGLAIDAEIGQHNVFARKNYFYPDLPKGYQISQMELPIVGKGHLDIAMEDGTVKRVGIT
RAHLEEDAGKSLHEEFSGATGIDLNRAGTPLLEIVSEPDMRSAKEAVAYVKAVHALVRYL
GICDGNMAEGSLRCDCNVSIRPKGQVEFGTRCEIKNVNSFRFIEKAINTEVQRQIELIED
GGRVIQQTRLYDPNKDETRPMRSKEEANDYRYFPDPDLLPVVIENSFLDDVRATLPELPP
QKRERFQAQFGLSVYDASVLATSREQADYFEKVASIGGDAKLAANWVMVELGSLLNKQGL
DIDQSPVSAEQLGGMLLRITDNTISGKIAKVVFEAMANGEGSADEIIEKRGLKQVTDTGA
ISAVLDEMLAANAEQVEQYRAADEAKRGKMFGFFVGQAMKASKGKANPQQVNELLKSKLE
G
NT seq 1446 nt NT seq  +upstreamnt  +downstreamnt
atgcaatgggaagtcgtgatcgggctggagattcatacccagctcactacccggtcgaaa
atcttttccggtagctccaccaccttcggttccgagccgaacacccaggccagcctggtt
gacctcggcatgcccggcgtattgccggtgctgaaccaggaagcggtgcgcatggcggtg
atgttcggtctggcgatcgatgccgagatcggccagcacaacgtgttcgcccgtaaaaac
tatttctacccggacctgcccaagggctaccagatcagccagatggaattgccgatcgtt
ggcaaaggccacctggacatcgcaatggaagacggcacggtcaagcgtgtcggcatcacc
cgtgcgcacctggaagaagacgccggtaaaagcctgcacgaagaattcagcggcgccacc
ggcatcgacctgaaccgtgccggcacgccgctgctggaaatcgtctccgagccggacatg
cgcagcgccaaggaagccgtggcttacgtcaaggcggtccacgcgctggtccgttacctg
ggcatctgcgacggcaacatggccgaaggctcgctgcgctgcgactgcaacgtgtcgatc
cgcccgaaaggccaggttgagttcggcacgcgctgcgagatcaagaacgtcaactcgttc
cgcttcatcgagaaggcgatcaacaccgaagtgcaacgtcagatcgagttgatcgaagac
ggcggccgggtgatccagcagactcgcctgtacgatccgaacaaggacgagacccgtccg
atgcgcagcaaagaggaagccaacgactaccgttacttccccgatccggacctgctgcct
gtggtcatcgagaactcgttcctcgacgacgtgcgcgccaccctgccggaattgccacca
cagaaacgcgagcgcttccaggcgcagttcggtctgtcggtctacgacgccagcgtcctg
gccaccagccgcgagcaagccgattacttcgagaaagtcgcgagcatcggcggcgacgcc
aaactggcggccaactgggtgatggttgaactgggcagcctgttgaacaaacagggcctg
gacatcgaccagtcgccggtctcggccgaacaactgggcggcatgctgctgcgcatcacc
gacaacaccatctccggcaaaatcgccaaagtggtgtttgaggccatggccaacggcgaa
ggcagcgcggacgagatcatcgaaaagcgcggcttgaagcaagtgaccgacaccggcgcg
atctcggcggtgctggacgagatgctcgcggccaacgccgaacaggttgaacaataccgc
gcggcagacgaagccaaacgcggcaagatgttcggcttcttcgtcggccaggccatgaaa
gcgtccaaaggcaaggccaacccgcaacaggtcaacgaactgctgaaaagcaagctcgaa
ggctga

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