KEGG   Pseudomonas frederiksbergensis: PFAS1_08580
Entry
PFAS1_08580       CDS       T04786                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pfk  Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfk03019]
    PFAS1_08580
   03009 Ribosome biogenesis [BR:pfk03009]
    PFAS1_08580
Messenger RNA biogenesis [BR:pfk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PFAS1_08580
Ribosome biogenesis [BR:pfk03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    PFAS1_08580
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: APV39394
UniProt: A0A1H4T7D3
LinkDB
Position
complement(1829574..1830116)
AA seq 180 aa
MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSDLNTLAEGPVIAIHHSDEILAGMDEW
NTRQHGGSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFLYTHMK
SLESFFHYRNLDVSTLKELAARWAPDVRDSFKKGSTHLALDDIRESIAELQHYRKHFIKF
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcaaaacccgcagaatctgatctggatcgacctggaaatgaccggtctgaaccctgat
accgacgtcatcatcgagatggccaccatcgtcaccgacagtgacctgaacaccttggcc
gaaggtccggtgatcgccatccaccacagcgacgaaattctcgctggcatggacgagtgg
aatacccgtcaacacggcggctccgggctgacccagcgcgttcgcgacagccgcatcagc
atggccgaagccgaagccgaaaccatcgctttcctggagaaatgggtgccgaagggcaaa
tcaccgatctgtggcaacagcatctgccaggatcgtcgcttcctttatacgcacatgaaa
tccctggaaagcttcttccactaccgcaacctcgacgtgtcgactctgaaagagttggcc
gcacgctgggcgccggacgtgcgcgacagcttcaaaaagggcagcactcacctggccctg
gacgacattcgcgaatcgatcgccgagctgcagcactatcgcaagcatttcatcaagttc
tga

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