Pseudomonas frederiksbergensis: PFAS1_11760 Help Entry PFAS1_11760       CDS       T04786                                  Name (GenBank) type VI secretion protein IcmF   KO K11891   type VI secretion system protein ImpL Organism pfk  Pseudomonas frederiksbergensis Pathway pfk02025   Biofilm formation - Pseudomonas aeruginosa pfk03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:pfk00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     PFAS1_11760  09140 Cellular Processes   09145 Cellular community - prokaryotes    02025 Biofilm formation - Pseudomonas aeruginosa     PFAS1_11760  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:pfk02044]     PFAS1_11760 Secretion system [BR:pfk02044]  Type VI secretion system   Imp/Vas secretion system core components    PFAS1_11760 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  IcmF-related_N IcmF-related IcmF_C IcmF_helical Bax1-I Motif Other DBs NCBI-ProteinID:  APV39988 UniProt:  A0A1P8EUR7 LinkDB All DBs Position 2559948..2563448 Genome browser AA seq 1166 aa AA seqDB search MKAFFSFIIRWVIPLLGLIALSLIIWFIGPLLEWLVPEGRRWALIVLVFAVWIAYRVFRI IQARRQAAEVMRSLAAQTPPDPTSIATAEELETLRQRMDEALTLLKKAKLGGDERRNLYE LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG RYTTQDSDATVDKAAWLGFLGLLKKQRPRRPIDGAFIAISLSDLLLGSDAERAAHAAAIR LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEYFDTLSKEERTQVWGTTFALDDGKSNDSP LAHLQSEFAGLEQRLNDRLVERLQQERDPARRDLIYGFPQQFGALKDCLQSFLEGVFKPN AFEERVLLRGVYFTSGTQEGSPIDRLIGSMAQSMNLDRQHLARQNGTGRSYFIEKLFSAV AFAERGLVGVNPKVERRRKWIARGVLASTVALVLVVGTLWWVSYRANQAYIAQVDQKVAP LGQAVQNLSPVQRDVLAVLPLLNAVKHLAGDAPNWAEGLGLYQGDMLEAESGSVYRKLLI AVFAPRLLTRIEEQLHGGGNSDFLYEGLKAYLMLADSEHYDADFIKAWIALDWDRSLPRD LPADQRLALAEHLRALFERHPPTARLDPRLIDDLRRQLQQLPVAQRVYDRVKRQKLPDGI PDFRINEAAGRDAALVFSRKSGKPLGEPLSGFFTAKGYRQGFLLTSLNQTGTLAEEQWVL GRDQAEQQDVASLAADVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVISGPTSP LKKLLVAVAKETDLQQEERLLAAKGAPVEGGVDKLKERLGSLLGQEQARQNTAAASEDPI TAHFAELNRIVSKSEGEPAAIDGLLADMNALYVQVSAMVGASGDALLGEAKNQAVAAATR VNLNAERQPPLVQGLVKSVVNSTTNSMMGGVRNQLNAAWTSEVVNIYRQSLAGRYPMSPG SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSTQAWRWQPGAAQKLGIAPGVLQTFQ RAATIRDAFFRSGGTQPMVRFELKPVTMDATVTQFLLDLDGQQLSYDHGPSRPTSMQWPN PGSIGVVRISIMPPSASGRSGITLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDGASAS YELRANSAFNPFKSRVLSGFSLPERL NT seq 3501 nt NT seq  +upstreamnt  +downstreamnt gtgaaggcgtttttcagttttatcatccgctgggtcatcccgctgctggggctgatcgcc ctgagcctgatcatctggtttatcgggccgctgctcgaatggctggtgcctgaaggtcgg cgctgggcgctgatcgttctggtgttcgcggtgtggattgcctaccgggtgtttcgcatc atccaggcccgccgtcaggccgccgaagtgatgcgcagcctggcggcgcaaaccccgccg gacccgaccagcatcgccacggccgaagagcttgaaaccctgcgccagcgcatggacgaa gccttgacgctgttgaagaaagccaagctgggcggtgacgagcggcgcaatctctatgaa ctgccgtggtacgtgatcatcggcccgccgggttcgggcaagaccacggcgctggtcaac tccgggctgcattttccgttggcggcgcaattgggcgccggggcggtacgcggcgtcggt ggcacgcgcaattgcgattggtggttcaccgatcaggccgtgctgctcgacacggccggg cgctacaccacccaggacagcgatgcgacggtggataaagccgcatggctgggctttctc ggcctgttgaaaaaacaacggccccgacgcccgattgacggtgcgttcatcgccatcagc ctttccgatctgctactgggcagcgacgccgagcgcgccgcccatgccgccgcgatccgc ctgcgtatccaggagctctacacgcaactgggcgtacgttttccgatctacctgatgctg accaaactcgatctggtgccggggttcatggagtatttcgataccctgagcaaggaagag cggactcaggtctggggcacgacctttgccctggacgacggtaaaagcaatgacagcccg ctggcccatctgcaaagcgaattcgccggcctggagcagcgcctcaacgatcgtttggtg gaacgtttgcaacaggaacgcgacccggcgcggcgcgatctgatctacggcttcccgcag cagttcggcgcgttgaaggattgcctgcaaagcttccttgagggcgtattcaaacccaac gcctttgaagagcgagtgctgttgcgcggggtgtatttcaccagcggtacccaggaaggc agcccgattgaccgcctgatcggttccatggcccagagcatgaacctggaccgccagcac ctggcgcgccagaacggcaccggacgcagttacttcatcgaaaaactcttcagcgccgtg gccttcgccgagcgtgggctggtgggggtcaacccgaaagtcgaacgtcggcgcaagtgg attgcccggggcgtgctggcctcgaccgtggccttggtgctggtggtcgggaccttgtgg tgggtcagctaccgcgccaaccaggcgtatatcgcgcaagtcgatcagaaagtcgcaccc ctgggccaggccgtgcaaaacctcagcccggtgcaacgggacgtgcttgcggtgttgccg ttgctcaacgcggtgaagcatctggccggcgacgcaccgaactgggccgaaggcctgggc ctgtatcagggcgacatgcttgaagccgagtccggcagcgtctatcgcaagctgttgatc gcggtcttcgcgccacgcttgctcacgcgcatcgaagagcaactgcacggcggcggcaat tcggacttcctttacgaaggcttgaaggcctacctgatgctcgccgacagcgagcattac gatgccgacttcatcaaggcgtggatcgccctcgactgggaccgcagcctgccgcgcgac ttgccggccgatcagcgtctggccctggcagagcacttgcgggcgctgttcgagcgccat ccgcccaccgcacgtctggacccgcgcctgatcgatgacctgcgccgacagttgcaacaa ctgccggtggcccagcgtgtctatgaccgggtcaagcggcagaaactgccggacggcatt ccggattttcgtatcaacgaagcggccgggcgcgatgccgcgctggtgttcagccgcaag agcggcaagccgctgggcgaacccttgagcggcttcttcacggccaagggttaccgccaa gggtttttgctcaccagcctgaaccagaccggcaccctggccgaggagcagtgggtgctc ggtcgcgaccaggcagaacagcaggacgtcgccagcctggccgccgatgtgcgacgcctg tatttccaggattaccagcgtcagtgggacgccttgctggcggatatcgactttgtgccg atcaccagcgtggcccaggccgccgatgtgttgcgggtgatttccggcccgacctcgcca ttgaaaaaactgctggtggcggtggcgaaggaaaccgatctgcaacaggaagaacgcctg ctggccgccaagggtgcgccggtggaaggcggggtcgacaagctcaaggagcgcttgggc agcttgctcggccaagagcaggcgaggcaaaacacagctgcggcgagcgaagatccaatc accgcgcattttgccgagctcaaccgcatcgtcagcaaaagcgaaggcgagccggcggcc atcgacggcctgctggccgacatgaacgccctgtacgtgcaggtcagcgccatggtcggc gccagcggcgatgccttgctcggcgaagccaagaaccaggccgtagccgctgcgacacgg gtcaacctcaatgccgaacgtcagccgccgctggtgcaggggctggtcaagtcggtggtc aactccaccaccaacagcatgatgggcggggtacgcaatcaattgaatgcggcctggacc agcgaagtggtgaacatctatcgccagtccctggccgggcgttatccgatgtcgccgggc agtgcgcgggacgcgacgctcgacgacttcggccagttcttcggtgtgggcggggtgatg gacaactacttccgcaaatacctgcaaccgtatgtggatacctcgacccaggcctggcgc tggcaaccgggcgccgcgcagaagctcggtattgcccccggcgtgctgcaaaccttccag cgggcagcgaccatccgggacgcgttttttcgttccggcggtacccaaccgatggtgcgc ttcgaactcaagccggtgacgatggacgccactgtcacccagtttttgctcgacctcgac ggccagcaattgagctacgaccacggtccgagccgcccgacctctatgcaatggcccaac cccggcagcatcggcgtggtgcggatttcgatcatgccgccttcggccagcggtcgttcc ggcatcaccctggacgggccatgggcgtggttccgtctgctggagcaatcggacctgacg gccggcaattcgccggatcgcttcaacctgcgactgcgggtcgacggtgccagcgcctct tatgaactgcgcgccaacagcgccttcaacccgttcaagagccgtgtgctcagcggtttc agcttgccggagcggttatga

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