Pseudomonas frederiksbergensis: PFAS1_15830
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Entry
PFAS1_15830 CDS
T04786
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00550
Peptidoglycan biosynthesis
pfk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PFAS1_15830
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pfk01003
]
PFAS1_15830
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfk01011
]
PFAS1_15830
Enzymes [BR:
pfk01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PFAS1_15830
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PFAS1_15830
Glycosyltransferases [BR:
pfk01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PFAS1_15830
Peptidoglycan biosynthesis and degradation proteins [BR:
pfk01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PFAS1_15830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
APV40752
UniProt:
A0A1P8EXD1
LinkDB
All DBs
Position
3416860..3419184
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AA seq
774 aa
AA seq
DB search
MTRTRSPRTPKKPPSKGLRPWLGWALKLSLVGLVVLAGFAVYLDAIVQEKFSGKRWTIPA
KVYARPLELFVGQKLSKDDFLTELDALGYRRESVVNGPGAASVSGNTVNLNTRGFQFYEG
MEQAQPVRVRFSGDYVAELSATNGSKLSVVRLEPLLIGGLYPKNLEDRILIKIDQVPPYL
LETLVAVEDRDFYHHFGVSPKSIARAIWVNGSSGRMRQGGSTLTQQLVKNFYLTNERSLS
RKLTEAMMALLLELHYDKPEILEAYLNEVFIGQDGQRAVHGFGLASQFFFSQPLAELKLH
QVALLVGMVKGPSSYNPRRYPERALERRNLVLDVLQEQGVATAEQVEAAKKMPLGVTKRG
SLADSSFPGFLDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEASVNDTFKRLSGR
KGSDEVEAAMVVTNPETGEVQAMIGSRQAGFAGFNRALDAVRPIGSLIKPAVYLTALEKP
SQYTLTSWLSDDSFSVKGADGQVWKPQNYDRRSHGTVFLYQGLAHSYNLSTARLGLAVGV
PNVLKTLARLGVSREFPAFPSMLLGAGGLTPIEVATMYQTLANGGFNTPMRGIRSVLTAE
GEPLKRYPFQIQQRFDPASIYLVQSAMQRVMREGTGSSVYNVLPKTLTLAGKTGTSNDSR
DSWFAGFSQDLLAVVWLGRDDNGKTPFTGATGALQVWTSFMRKADPLPLDMPQPDNIVQA
WVDSRTGQGSDANCPGAVQMPYIRGSEPPPGAACGGESPVSGETVMDWVKGWMN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtactcgatccccccgcacccccaaaaaaccaccttccaagggcctgcgcccc
tggctgggctgggcccttaaactcagtctggtcggccttgtggtgctggccgggttcgcg
gtttacctcgacgcgatcgtccaggagaaattctccggcaagcgctggaccattccggcc
aaggtgtacgcgcgcccgctggagctgttcgtcggacaaaagctcagcaaggacgatttt
ctgactgaactcgatgccttgggttatcgacgggaaagcgtggtcaacggccccggcgca
gcctcggtcagcggcaataccgtcaatttgaatactcgtggttttcagttctatgaaggc
atggagcaagcgcaaccggtacgggtgcgtttctccggtgattacgtggccgaactgtcg
gcgaccaacggttcgaagctttcggtcgtgcgcctcgagccactgctgatcggtggcctg
tacccgaaaaacctcgaagaccggattctgatcaagatcgatcaggtgccgccgtacttg
ctcgaaaccctggtggctgttgaagaccgcgacttctatcaccactttggcgtttcgccg
aagtcgatcgcgcgggcgatctgggtcaacggttcttccggccgcatgcgtcagggcggc
agtacgctgactcaacagttggtcaaaaacttctacctgaccaacgaacgcagcctgagc
cgcaaactcaccgaagccatgatggcgctgctgcttgagctgcattacgacaaaccggaa
atccttgaggcttacctcaacgaagtgttcatcggtcaggacggtcagcgtgcggtgcac
ggttttggcctggcgagccagttcttcttcagccagccgttggccgaactgaagctgcat
caagtggcgttgctggtgggcatggtcaaagggccgtcttcctacaaccctcgtcgttat
ccggagcgggcccttgagcggcgcaacctggtgctcgacgtattgcaggaacagggcgtc
gccactgccgagcaagtcgaagcggcgaagaagatgccgttgggcgtgaccaagcgcggc
agcctggcggatagctcattccctggcttcctcgacctggtcaagcgccagctgcgcgaa
gactatcgtgacgaagacttgaccgaggaaggtctgcggatcttcaccagtttcgacccg
atcctgcagatgaaagccgaggcgtcggtcaacgacactttcaagagactctcggggcgc
aagggttccgatgaggttgaagcggccatggtcgtgaccaatccggaaaccggtgaagtc
caggccatgatcggcagtcgtcaggcgggttttgccggtttcaaccgtgcgctggatgcg
gtacgaccgatcggctctttgatcaagccggcggtttatctgacagcccttgagaaaccg
agccagtacacattgaccagttggctgtcggacgattccttctcggtcaaaggcgcggac
ggtcaagtctggaaaccgcagaactacgatcgccgttcccatggcactgtgtttctgtat
cagggcctggcgcattcctacaacctgtcgaccgcgcgtctcgggttggcggtgggcgta
ccgaatgtcctgaagaccctggcgcgtctcggtgtgagtcgcgaattcccggcgttcccg
tcgatgttgctgggcgctggcggtctgaccccgatcgaagtggcgacgatgtaccagacc
ctggccaatggcggcttcaacacgccgatgcgcgggattcgcagcgtattgactgcagaa
ggcgaaccgctcaagcgttatccgttccagattcagcagcgtttcgatccggcctccatt
tacctggtccagagcgccatgcagcgagtcatgcgtgaaggtaccggcagttcggtttac
aacgtgctgccgaaaaccctgacgttggccggcaagaccggtaccagtaacgattcgcgg
gacagctggtttgccggtttcagtcaggacctgctggcagtggtctggctgggtcgcgat
gacaacggcaagacaccgttcaccggtgccaccggtgcgttgcaggtctggaccagtttc
atgcgcaaggccgatccgttgccgctggacatgccgcagccagacaacattgttcaggcc
tgggtcgattcgcgtaccggacaaggctctgatgccaactgcccaggcgcggtacagatg
ccgtatattcgcggcagcgaaccgcctcccggtgccgcttgcggtggcgaaagccctgtt
tccggcgaaacggtgatggattgggtcaagggctggatgaattaa
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