KEGG   Pseudomonas frederiksbergensis: PFAS1_21190
Entry
PFAS1_21190       CDS       T04786                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
pfk  Pseudomonas frederiksbergensis
Pathway
pfk03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PFAS1_21190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfk03400]
    PFAS1_21190
Enzymes [BR:pfk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     PFAS1_21190
DNA repair and recombination proteins [BR:pfk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     PFAS1_21190
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: APV41746
UniProt: A0A1P8EZV5
LinkDB
Position
4570525..4571319
AA seq 264 aa
MKNLKIATFNVNGMRARLPNLLAWLEREQPDIACLQELKSVDSAFPVAELEAAGYGALWQ
GQSSWNGVAILARDAQPLERRRGLPGDDSDTHSRYLEAAVHGILVGCLYLPNGNPQPGPK
FDYKLAWFERLIHYAQTLQASEHPVVLAGDYNVVPTDLDIYNPRSWLKDALLQPESRECY
QRLLAQGWTDSLRHLYPQDRLYTFWDYFRQHWQKNSGLRIDHLLLNPVLSPYLQEGGVDA
WVRNEPHASDHAPAWIRLSPRKRR
NT seq 795 nt   +upstreamnt  +downstreamnt
atgaagaacctgaaaatcgcgacattcaacgtcaacggcatgcgcgcccgactgccgaac
ttgctggcctggcttgagcgagagcaaccagacatcgcctgtttgcaggagctcaagtca
gtcgacagtgcatttcccgtcgccgagcttgaggccgcgggttatggcgcgctctggcaa
ggacagtcgtcgtggaacggcgtggcaattctggcgcgggacgcgcagccgctggagaga
cgtcgaggcctgccaggcgatgacagcgacacccatagccggtatctggaggccgccgtg
cacgggattctggtgggctgtctgtacctgcccaacggcaatccgcagccggggccgaag
ttcgattacaagctggcgtggttcgaacggctgatccactacgcgcagacgcttcaggcc
agcgagcatcctgtggtcctggccggtgactacaacgtggtgcccaccgacctcgacatt
tacaacccgcgatcctggctgaaggatgcgttgctgcaacctgaaagccgcgagtgttat
cagcgcctgctggcccagggctggaccgattccttgcgccatctgtatccgcaggatcgg
ctctataccttctgggattattttcgccagcactggcaaaaaaactcggggctgcgcatc
gatcatctgttgcttaatccggtgctgagcccttatttgcaggagggcggagtggatgcc
tgggttcgcaacgagccccacgcgagtgatcacgcgccggcgtggattcgattgagtccg
cgtaagcggcgttga

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