KEGG   Pseudomonas protegens Pf-5: PFL_5194Help
Entry
PFL_5194          CDS       T00249                                 

Gene name
ddlA
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
pfl  Pseudomonas protegens Pf-5
Pathway
pfl00473  D-Alanine metabolism
pfl00550  Peptidoglycan biosynthesis
pfl01100  Metabolic pathways
pfl01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:pfl00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    PFL_5194 (ddlA)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PFL_5194 (ddlA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    PFL_5194 (ddlA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pfl01011]
    PFL_5194 (ddlA)
Enzymes [BR:pfl01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     PFL_5194 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:pfl01011]
 Precursor biosynthesis
  Amino acid ligase
   PFL_5194 (ddlA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp ATP-grasp_4 ATP-grasp_3 CPSase_L_D2 ATPgrasp_ST RimK
Motif
Other DBs
NCBI-ProteinID: AAY94413
UniProt: Q4K662
LinkDB All DBs
Position
complement(5951069..5952163)
Genome map
AA seq 364 aa AA seqDB search
MSKLRVGIIFGGRSAEHEVSLQSARNIVDALDRTRFEPVLIGIDKQGHWHLNDTSNFLIN
QENPALIALNQSNRELAVVPGKASQQLVETSSQELLGHVDVIFPIVHGTLGEDGCLQGLL
RMADLPFVGSDVLGSAVCMDKDISKRLLRDAGLAVTPFITLTRATRARYGFARARETLGL
PLFVKPANQGSSVGVSKVDNEAEYEAAVELALGFDHKVLVESAVRGREIECAVLGNDQPI
ASGCGEIVVSNGFYSYDSKYIDGEAAQVLVPADISIEHSERIRALAVEAFQVLGCSGLAR
VDVFLTDEGEVLINEINSLPGFTRISMYPKLWQATGMSYSELVSRLIELALERHAERQGL
KINR
NT seq 1095 nt NT seq  +upstreamnt  +downstreamnt
atgagcaagttgcgggtcgggattatttttggtggccgttcggccgaacacgaagtgtcg
ctgcagtcggcgcgcaatatcgtcgatgccctggatcgcacgcgtttcgagccggtgctg
atcggcatcgacaaacaggggcactggcacctcaacgacacctcgaacttcctgatcaac
caggaaaacccggcgctgatcgccctcaaccagtccaatcgcgaactggcggtggtgccg
ggcaaggccagccagcaactggtggaaacctccagccaggaactgctggggcatgtcgat
gtgatcttccccatcgtccacggcaccctgggcgaagacggttgtctgcagggcctgctg
cgcatggccgacctgccctttgtcggctccgacgtgctgggctcggcggtgtgcatggac
aaggacatcagcaagcgcctgctgcgcgatgccgggctggcggtgaccccgttcatcacc
ctgacccgggccacccgtgctcgctacggttttgcccgggcccgggaaacactcggcctg
ccgctgttcgtcaagccggccaaccagggttcatcggtgggggtgagcaaggtcgacaac
gaggccgaatacgaggccgcggtggaactggccctgggcttcgatcacaaggtgctggtg
gagtcggccgtgcgtgggcgggaaatcgaatgcgcggtgctgggcaacgaccagcccatt
gccagtggctgcggcgagatcgtggtcagcaacggtttctattcctacgacagcaagtac
atcgacggggaggcggcccaggtgctggtaccggcggacatcagcatcgagcacagcgag
cgcattcgggccctggctgtcgaggcattccaggtgctgggctgctccgggctggctcgg
gtcgatgtgtttctcaccgatgagggggaagtgctgatcaacgaaatcaactcgctgccg
gggttcacccggatcagcatgtaccccaaactttggcaggccaccggcatgagctacagc
gagctggtgagccgcctgatcgagctggcgctggagcgtcacgctgaacggcaagggctg
aaaatcaaccgctga

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