Pseudomonas protegens Pf-5: PFL_5980
Help
Entry
PFL_5980 CDS
T00249
Symbol
ubiD
Name
(GenBank) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00130
Ubiquinone and other terpenoid-quinone biosynthesis
pfl01100
Metabolic pathways
pfl01110
Biosynthesis of secondary metabolites
pfl01240
Biosynthesis of cofactors
Module
pfl_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
PFL_5980 (ubiD)
Enzymes [BR:
pfl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
PFL_5980 (ubiD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
AAY95170
UniProt:
Q4K3Z5
LinkDB
All DBs
Position
complement(6797490..6798956)
Genome browser
AA seq
488 aa
AA seq
DB search
MQYRDLRDFISGLEQRSELKRIQVPVSPVLEMTEVCDRTLRAKGPALLFENPTGYDIPVL
GNLFGTPERVALGMGAEAVSELREIGKLLAFLKEPEPPKGLKDAWSKLPIFRKIISMAPK
VVKDAVCQEVVIEGDDVDLGMLPVQTCWPGDVGPLITWGLTVTKGPNKDRQNLGIYRQQV
IGRNKVIMRWLSHRGGALDYREWCEKHPGQPFPVSVALGADPATILGAVTPVPDSLSEYA
FAGLLRGNRTELVKCRGNDLQVPATAEIILEGVIHPGEMADEGPYGDHTGYYNEVDSFPV
FTVERITHRIKPIYHSTYTGRPPDEPAILGVALNEVFVPILQKQFPEITDFYLPPEGCSY
RMAVVTMKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVTDDDINARDWNDVIWAITTRMDP
KRDTVMIDNTPIDYLDFASPVSGLGSKMGLDATHKWPGETTREWGRVIVKDEAVTRRIDA
IWNQLGID
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatcgcgacttgcgcgactttatcagcggcctggaacagcgctcggaactcaag
cgcatccaggttccggtgtccccagtgctggaaatgaccgaggtctgcgatcgcaccttg
cgtgccaaaggcccggccctgctgtttgaaaaccccaccggttatgacatccccgtgctc
ggcaacctgttcggcacccccgagcgcgtggccctgggcatgggcgccgaagcggtcagc
gaactgcgcgagatcggcaagctgctggcgttcctcaaggagccggagccgcccaagggg
ctcaaggacgcctggtccaagctgccgatcttccgcaagatcatttccatggcgcccaag
gtggtcaaggatgcggtgtgccaggaagtggtgatcgaaggcgacgacgtcgaccttggc
atgctgccggtgcagacctgctggccgggcgatgtcggcccgctgatcacttggggcctg
accgtgaccaagggcccgaacaaggaccggcagaacctgggtatctatcgtcagcaggtg
atcggccgcaacaaggtgatcatgcgctggctgagccaccgcggcggcgcgctggattac
cgcgagtggtgcgagaagcacccgggccagccgttcccggtgtcggtggcgctgggcgcg
gacccggcgaccattctcggcgccgtgaccccggtgccggacagcctttccgaatacgcc
ttcgccggtctgctgcggggcaaccgcactgagctggtgaagtgccgtggtaacgacctg
caggttccggccacggctgaaatcatccttgaaggggtgatccatcccggcgagatggcc
gatgaaggcccgtacggcgaccacaccggctactacaacgaggtcgacagcttcccggtg
ttcaccgtggagcgcatcacccaccgcatcaagccgatctaccacagcacctacaccggc
cggccgcccgatgagccggcgatcctcggcgtcgcgctgaacgaagtcttcgtgccgatc
ctgcagaagcagtttccggaaatcaccgacttctacctgccgcccgaaggctgttcctac
cgcatggcggtggtgaccatgaagaagcagtacccgggccacgccaagcgggtcatgctg
ggtgtctggtcgtttttgcgacagttcatgtacaccaagttcgttatcgtcaccgacgac
gatatcaatgcccgggactggaacgatgtgatctgggccatcaccacgcgcatggacccc
aagcgcgacacggtgatgatcgacaacaccccgatcgactacctcgacttcgcctcgccg
gtgtctggcctgggctcgaagatggggctcgatgcgactcacaagtggcctggagaaacc
acccgagagtggggccgggtcatcgtcaaggatgaggcggtcacccgccggatcgatgcc
atctggaatcagttaggaatagattga
DBGET
integrated database retrieval system
