Pseudomonas fluorescens UK4: HZ99_20475
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Entry
HZ99_20475 CDS
T03319
Name
(GenBank) lipid transporter ATP-binding/permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HZ99_20475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfn02000
]
HZ99_20475
Enzymes [BR:
pfn01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
HZ99_20475
Transporters [BR:
pfn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HZ99_20475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
nSTAND1
AAA_22
AAA_30
AAA_29
ABC_ATPase
RsgA_GTPase
nSTAND3
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AIG04444
UniProt:
A0A379I6F9
LinkDB
All DBs
Position
4492614..4494434
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AA seq
606 aa
AA seq
DB search
MSSPEPKTQSTLAIYFRLLTYVRPYVGLFILSIVGFLIFASTQPMLAYILKYFVDGLANP
EASLFPGNPYLGKLQLLETVPLMIVLIAAWQGVGSFLGNFFLARVSLGLVHDLRVVLFNK
LLELPNRFFDKNNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVIFLFCTLVWMNWKL
TLVMLAILPVIGMMVNSTSRKFRKQSKKIQVSMGDVTHVASETIHGYRVVRSFGGEQYEK
VRFEQASLSNTEKQLAMTKTGAVYTPMLQLVTYSAMAVVMFLVLYLRGDASPGDLVAYIT
MAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDEPVEVDQGVIEHERLAGRIEVRNLSF
QYPESDKKVLNDISFIVEPGQMVALVGRSGSGKSTLAGLIPRFYQHEHGQILLDGVRVQD
FTLRNLRRQIALVTQQVTLFNDTVTNNIAYGDLAGAPTEAVHHAAREAYADEFIVKMPQG
YETLVGENGVLLSGGQRQRIAIARALLKDAPLLILDEATSALDTESERHIQAALDHVVKN
RTTLVIAHRLSTIEKADLILVMDDGQIVERGTHVELLAKNGYYARLHAKEFEEGDAVAPS
HVTDAY
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcctgaaccgaaaacccagtcgacgctggcgatttactttcgcctgctgact
tacgtacggccttatgtgggtctgttcatcctgagtatcgtcgggttcctgatcttcgca
tcgacccagccgatgctcgcttacatcctcaagtatttcgtcgatggcctggcgaacccc
gaggccagtctgtttcccggcaacccgtatctgggcaagttgcaactgctggaaaccgtg
ccgctgatgatcgtgctgatcgcagcctggcagggtgtgggttctttcctcggtaacttc
ttcctggcccgggtttccctggggctggtccacgacctgcgcgtggtgctgttcaacaag
ctgctggagttgccgaaccgtttctttgacaagaacaactccggccacctgatttcccgc
attaccttcaacgtcaccatggtcaccggtgcggccaccgatgcgatcaaggtggttatc
cgtgaaggcatgaccgtgattttcctgttctgcaccctggtctggatgaactggaaactg
accctggtaatgctggcgatcctgccggtgatcggcatgatggtgaacagcaccagccgt
aaattccgcaagcaaagcaagaaaatccaggtgtccatgggcgatgtgacccatgtggcc
tccgagacgatccacggctaccgcgtggtccgcagctttggcggcgagcagtatgaaaag
gtgcgcttcgaacaggcgagtctgagcaataccgagaagcaactggcgatgaccaagacc
ggcgcggtgtacacgccgatgttgcagttggtgacctacagtgcaatggccgtggtcatg
ttcctggtcctgtatctgcgtggcgatgcgtcgccgggcgacctggtggcctatatcacc
atggccggcctgttgcccaagcccattcgccagctctccgaagtcagctcgactatccag
aaaggcgtggcaggggccgaaagcattttcgagcaactggatgagccggtagaggtcgac
cagggcgtgattgaacatgagcgtctggctgggcgtatcgaggtgcgcaacctcagcttc
cagtacccggaaagcgacaagaaggtgctcaacgacatcagctttatcgtcgagccaggg
caaatggtcgcgctggtggggcgttcgggcagcggcaagtcgaccctggcgggcttgatc
ccgcgcttctatcagcatgagcacgggcagatcctgctcgatggcgtacgtgtccaggat
ttcaccctgcgcaacctgcgccggcaaatcgccctggtgacccagcaggtcaccttgttc
aacgacaccgtgaccaacaacatcgcctacggcgacctggccggcgcgccaaccgaggcg
gtgcaccatgccgctcgcgaagcgtatgccgatgagttcatcgtgaagatgccccagggc
tatgaaaccctggtaggcgagaacggcgtgctgctgtccggcggccagcgccagcgcatc
gcgattgcccgggccttgctcaaggatgcaccgctgctgatcctcgacgaggcaacctcg
gccctggataccgagtccgagcgtcatatccaggcggccctggatcatgtggtgaaaaac
cgcacgaccctggtaattgcccaccgcttgagcaccatcgagaaagccgacctgatcctg
gtgatggacgacggccagatcgtcgagcgcggcacccatgtcgagttgctggcgaagaat
ggctactacgcccgtttgcacgccaaggagttcgaagagggcgacgcagtggcgccttcc
cacgtgacggatgcctattga
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