Pseudomonas fluorescens UK4: HZ99_25355
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Entry
HZ99_25355 CDS
T03319
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent helicase HrpA [EC:
3.6.4.13
]
Organism
pfn
Pseudomonas fluorescens UK4
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
HZ99_25355
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_19
AAA_22
nSTAND3
NACHT
T2SSE
AAA_25
SLFN-g3_helicase
NleF_casp_inhib
Motif
Other DBs
NCBI-ProteinID:
AIG05349
UniProt:
A0A379IA00
LinkDB
All DBs
Position
5524789..5528700
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AA seq
1303 aa
AA seq
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MTDQAPAIDQLLKTLDHAMLADRQRLRRQLLELRKKPDEEKLAQWVARMQASCAQVTARG
ASVPQIRYDDSLPIAAKRDEIKAALLKHQVLIIAGETGSGKTTQLPKICLEIGRGQYGLI
GHTQPRRIAARSVASRVAEELATPLGALVGYQVRFEDQSDSNTLIKLMTDGILLAETQND
RYLERYDTIIVDEAHERSLNIDFLLGYLKTLLPRRPDLKVIITSATIDLERFSKHFDDAP
IVEVSGRTFPVQTWYRPLTLEQDEEGNRVEDDLTVDQAILATLDEIAAFERSERKSPGDV
LVFLPGEREIRDAADMLRKAQLKHTEILPLYARLSPAEQQRIFQSHPGRRVVLATNVAET
SLTVPGIRYVIDSGTARISRYSYRAKVQRLPIEAISQASANQRKGRCGRVEPGICVRLYS
EEDFIGRPEFTDPEILRTNLAAVILQMLHLRLGEITDFPFIEPPDGKAISDGFNLLQELS
AVDRNSQLTPLGRQLARLPVDPRMGRMLLEAAKLGSLQEVLIVASAMSIQDPRERPPERQ
QAADQAHAQWKDPDSDFAGLVNLWRGFEEQRQALTASPLRNWCRKHFLNYLRLREWRDSH
RQLSLICRDMQLAVNKEPADFPKLHKAVLSGLLSQIGQKTEEGDYLGARQRRFWIHPSSG
IGKKRPQWLMTAELVETTKLYARMVAKIDADWIEPLAGHLIKKNHFEPHWEKKRGQVVAF
EQITLFGLIVVGRRPVHYGPVDPVVSRELFIREGLVRGEIQSRAKCLGANQQLLEQLDEL
EAKARRRDILADEETLYAFYDARLPAQIHQTATFDSWYKVTSQKDPQLLIMREEDVLARE
ASEVTAAHYPDTLHLGDLALALSYHFEPNHPRDGVTLRVPAPLLPALPAERLEWLVPGLI
EAKCIALVRNLPKALRKNFVPVPDFVKAALQRIEFAQGSLPQALGRELLRMTGVRVSDDA
WAEAAQQVDSHLKMNLEVVDAQGKFLGEGRDLAALTARFVEASQAALAVPQTAKSQQPVE
AKVFAAVAETTQQQIAGLSMTVYPALVEENGTVKEGRFSTAAEAEFQHRRGLQRLLMQQL
AEPAKFLRGKLPGLTELGLMYRELGRIDALVEDILLASLDSCVLEGEANLPRDGAGLAAL
AERKRGSWTEHAERLARLTLEILKLWHGLQKRFKGKIDLAQAVALNDIKQQLNNLVYPGF
VRETPAQWFKELPRYLKAIELRLEKLPSQVQKDRVWSSELSGLWSQYQTRLNKHTQEGKR
DPQLALYRWWLEEYRVSLFAQQLGTKVPISDKRLSKQWSQVEP
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccaagcgcccgctatcgaccaactcctgaaaactctcgatcacgccatgctc
gccgaccgccagcgcttgcgccggcagttgcttgagctgcgcaagaaacccgatgaggag
aagctggcgcagtgggtggcgcgcatgcaggcgtcttgtgcccaggtcacggcgcgtggt
gccagcgtgccgcagatccgctatgacgacagcctgcccatcgccgccaagcgcgacgag
atcaaggctgcgctgctcaaacatcaggttctcattattgcgggcgagaccggctcgggt
aaaaccacgcaattgccgaagatctgcctggaaattggccgcggccagtacggcttgatc
ggccatacccagccccggcgtatcgccgcgcgcagtgtggcgagccgggtcgcggaagaa
ctggccacgccgctgggggcgttggtcggctaccaggtgcggttcgaggaccagagcgat
tccaacacactgatcaagttgatgaccgacggcatcctgctggccgaaacccagaacgat
cgctacctcgaacgctacgacacgatcatcgtcgacgaagcccacgaacgcagcctgaac
atcgacttcctgctcggctacctgaagaccctgctgccgcgccgtcccgacctgaaagtg
atcatcacctcggcgaccatcgacctggagcgcttttccaagcacttcgacgatgcgccg
attgtcgaggtctcggggcgtacattcccggtgcaaacctggtatcgcccgctgaccctg
gaacaggacgaagaaggcaaccgcgtcgaggatgacttgacggtggaccaggcgatcctc
gccaccctcgatgaaatcgccgcctttgagcgcagcgagcgcaagagccctggcgatgtg
ctggtgttcctgccgggtgagcgcgagattcgcgatgccgccgacatgttgcgcaaggcc
cagctcaagcacaccgaaatcctgccgttgtacgcgcgcctgtcaccggccgaacagcag
cgcattttccagtcccatccggggcggcgcgtggtgctggcgaccaacgtcgcggaaacc
tcgctgaccgtgccgggcatccgctacgtgatcgacagcggcaccgcgcgcatcagccgc
tacagctaccgcgccaaggtccagcgcctgcccatcgaagcgatttcccaggccagcgcc
aaccagcgcaaaggccgctgtggtcgggtcgagccgggcatttgcgtgcgtctgtacagc
gaagaagattttatcgggcgcccggaattcactgacccggagatcctgcggaccaacctg
gcggcggtgatcctgcagatgctgcatctgcgcctgggcgaaatcaccgatttcccgttt
atcgagccgccggatggcaaggccatcagcgatggcttcaacctgctgcaggaactctcg
gcggtggatcgcaacagccagttgacacccctgggccggcaactggcgcgcctgccggtg
gacccgcggatgggccgcatgttgctggaagcggccaagctcggcagcttgcaggaagtg
ctgatcgtcgccagtgccatgtcgatccaggacccgcgcgagcgtccgccggagcgccaa
caggccgccgaccaggcccacgcgcaatggaaggatcccgattcggacttcgccgggctg
gtcaacctgtggcgcggctttgaagagcaacgccaggcattgaccgccagcccgctgcgc
aactggtgtcgcaagcatttcctcaactacctgcgactgcgtgaatggcgtgactcccat
cgccagttgagcctgatctgccgcgatatgcagttggcggtcaacaaggagccggcggac
ttcccgaaactgcacaaggccgtgttgtctggcctgctcagccagatcggccagaaaacc
gaagagggcgactacctcggtgcccgccagcgacgcttctggatccacccctcatcgggg
atcggcaagaagcgcccgcaatggctgatgaccgccgagttggtggaaaccaccaagctg
tatgcgcgcatggtggccaagatcgatgccgactggatcgagcccctggccgggcacttg
atcaagaaaaaccacttcgaaccccactgggagaagaagcgcggccaggtcgtggccttc
gagcagatcaccctgttcggcctgattgtggtggggcgccggccggtgcattacgggccg
gtggacccggtggtgtcccgcgagctgtttatccgtgaaggcctggtgcgtggcgagatc
cagtcccgggccaagtgcctgggcgccaatcaacagttactggagcaactggacgaactg
gaagccaaggcccggcgccgcgatatactggccgacgaagaaaccttgtacgccttctat
gacgcgcgcctgccggcgcaaatccaccagacggcgaccttcgacagttggtacaaggtc
accagccagaaagacccgcaactgctgatcatgcgcgaggaagacgtgctggcccgggag
gccagtgaagtcactgccgcccattaccccgacaccctgcacctgggcgacctggccctg
gccttgagttatcactttgaacccaaccacccccgcgacggcgtgaccttgcgcgtgccg
gcgccgttgttgccggccttgcccgccgaacgcctggagtggctggtgcccgggctgatc
gaggccaagtgcatcgccctggtgcgcaacctgcccaaggccctgcgcaagaacttcgtg
ccggtaccggacttcgtcaaggccgcgctgcaacgtatcgaattcgcccagggctcgttg
ccccaggcgctggggcgcgaactgttgcgcatgaccggcgtgcgggtcagcgatgacgcg
tgggctgaagctgcgcagcaggtggacagccatctgaagatgaacctggaagtggtcgac
gcccaaggcaagttcctgggcgagggccgcgacctggcagcgttgaccgcgcggtttgtc
gaggccagccaggccgccctggcggtgccgcaaacggccaaaagccagcaaccggtggag
gccaaggtcttcgccgccgtggccgagaccacccaacagcagatcgccgggctatcgatg
acggtgtatccggcgctggtggaggaaaacggcacggtcaaggaagggcgtttctctact
gccgccgaagccgagttccagcaccggcgaggcttgcagcgcctgttgatgcagcaattg
gccgaaccggcaaaattcctgcgcggcaaactgcccggcctgacggagctggggctgatg
taccgcgagttggggcgtatcgacgccttggtggaagatatcctgctggccagcctcgac
agctgcgtgctggagggcgaggccaacttgccgagggatggcgcgggcctggcagccctg
gccgagcgcaagcgcggcagttggaccgaacatgccgaacgcctggcgcgcctgaccctt
gaaatactgaagctgtggcacggcctgcaaaagcgtttcaagggcaagatcgacctggcc
caggccgtcgcactcaacgatatcaagcagcaactgaacaacctggtgtacccaggcttc
gtgcgcgaaaccccggcgcagtggttcaaggaactgccgcgctacctcaaggccatcgaa
ctgcgcctggaaaaactacccagccaggtgcagaaggatcgggtttggagcagcgagttg
agcggcctgtggagccaataccaaacgcgcctgaacaagcacacccaggaaggcaagcgc
gatccgcagttggcgctttaccgctggtggctggaggaataccgggtgtcgttgtttgcc
cagcagttgggcaccaaggtgccgatttccgacaagcgtttgagcaaacagtggagccag
gtcgaaccttga
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