Pseudomonas fluorescens Pf0-1: Pfl01_2613
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Entry
Pfl01_2613 CDS
T00283
Name
(GenBank) putative Ku domain protein
KO
K10979
DNA end-binding protein Ku
Organism
pfo
Pseudomonas fluorescens Pf0-1
Pathway
pfo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Pfl01_2613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfo03400
]
Pfl01_2613
DNA repair and recombination proteins [BR:
pfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Pfl01_2613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DDRGK
Motif
Other DBs
NCBI-ProteinID:
ABA74354
UniProt:
Q3KD01
LinkDB
All DBs
Position
complement(2991441..2992301)
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AA seq
286 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVALVSATSSQGVDFDWLDSRSMDPVGYKRVNKVTGKEVTKEH
IVKGVQYEKGRYVVLSEEEIRSAHPVSTQTIDIFAFVDSDQIPLQNIDTPYYLAPDKRGG
KVYALLRETLSKTKKVALARVVLHTRQYLAALMPLESALVLVKLRWPQEVRSLDELELGS
EVSKPQLAKGELDMAKRLVEDMTADWTPEDYKDEFENKIMALVDKKAHEGKIEDVETVSG
EEERKSADVIDLTELLKRSLGGKAPAKPAKKTASKAAPAKKTKKAS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggcaatctggaaaggcgcaatcagtttcggtctggtgcacatccccgtggca
ctggtctcggcgacgtcatcccagggcgtcgactttgactggctcgacagccgcagcatg
gacccggtcggctataaacgagtcaacaaggttactggcaaggaagtcaccaaagagcac
atcgtcaaaggcgtgcagtacgaaaagggccgctatgtggtgctcagcgaggaagaaatc
cgttcggcgcacccggtttcgacccagaccatcgacattttcgccttcgtcgacagtgac
cagatcccgttgcagaacatcgacacgccttattacctggccccggacaagcgcggcggc
aaggtctacgccttgctgcgtgagaccctgagcaaaaccaaaaaagtcgccctcgcccgc
gtggttttacacacgcgtcagtatctggcggcgttgatgcccctggagtcggcgctggtg
ctggtgaagctgcgctggccgcaggaggtgcgcagcctcgacgaacttgagctgggcagc
gaagtgagcaagccgcaactggcaaagggcgaactggacatggccaaacggctggtggaa
gacatgacggcggactggacgcccgaagactataaggacgagttcgaaaacaagatcatg
gcactcgttgacaagaaggcccatgaaggcaagatcgaagacgttgaaacggtttccgga
gaagaagagcgcaaatcggctgatgtgatcgacttgaccgaactgctcaagcgcagcctc
ggcgggaaagccccggcgaaaccggcgaagaagaccgccagtaaggcagcgccggcgaag
aagaccaaaaaagcctcgtaa
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