Pseudomonas fluorescens Pf0-1: Pfl01_4959
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Entry
Pfl01_4959 CDS
T00283
Name
(GenBank) putative DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Pathway
pfo03030
DNA replication
pfo03430
Mismatch repair
pfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pfl01_4959
03430 Mismatch repair
Pfl01_4959
03440 Homologous recombination
Pfl01_4959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfo03032
]
Pfl01_4959
03400 DNA repair and recombination proteins [BR:
pfo03400
]
Pfl01_4959
Enzymes [BR:
pfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pfl01_4959
DNA replication proteins [BR:
pfo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pfl01_4959
DNA repair and recombination proteins [BR:
pfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pfl01_4959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
CCCAP
Motif
Other DBs
NCBI-ProteinID:
ABA76696
UniProt:
Q3K6A8
LinkDB
All DBs
Position
5587653..5588690
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLGKHLQGALAPVYIISGDDPLLCQEAADAIRSAARQQGFDERQVFAADANFDW
GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALIEYCSRPAEDTVLLISLPKLDGSA
QKTKWGKALVEGQQTQFVQIWPVDANQLPSWIRQRLSQAGLSASQDAVELIAARVEGNLL
AAAQEIEKLKLMAEGGQITVETVQAAVADSARFDVFGLTDAVLNGEPAHALRMLEGLRGE
GVEPPVILWALARELRLLANISLQYSQGTPLDKCFSQAKPPVWDKRKPLMSKALQRYSAQ
RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLALLMAGQRLTLPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgctcccgcccaactcggcaaacacctgcaaggcgccctcgcgccggtctac
atcatcagcggcgatgacccgctgctgtgtcaggaagctgccgacgccattcgctccgct
gcccgtcagcaagggttcgacgaacgccaggtctttgccgccgacgccaatttcgattgg
ggtacgctgctgcaggccggcgccagcatgtcgctgttcgccgaaaagcgcttgctggaa
ctgcgcctgccttcgggcaagcccggtgacaagggcgccgccgcgctgatcgagtactgc
tcgcgcccggctgaagacacggtactgttgatcagcctgccgaagctggacggtagcgcg
cagaagaccaagtggggcaaggcgctggtcgagggtcagcagacccagttcgtgcagatc
tggccggtagatgccaaccagctgccgagctggattcgtcagcgactgtcccaggccggc
ttgtcggccagccaggacgcggtcgaattgatcgccgcgcgggtcgaaggcaatctgctg
gctgccgcgcaagagatcgaaaaactcaagctgatggccgagggcgggcagatcaccgtc
gaaaccgtgcaggcagccgtggccgacagtgcgcgcttcgacgtattcggcctgaccgac
gcagtgctcaacggcgaaccggctcacgccctgcgcatgctcgaagggctgcgcggtgaa
ggggtcgaaccaccggtgatcctctgggctctggcccgggagttgcgcttgctggccaac
atctcgttgcagtacagccagggcacaccgctggacaagtgcttcagtcaggccaagccg
ccggtctgggacaagcgcaaaccgctgatgagcaaggccctgcaacgttactcggcgcaa
cgctgggcgcagttgctgctcgaagcccagcgtatcgatgcgcagatcaagggccaggca
gccggttcgccgtggatgagcctcagccggttggcgctgctgatggccggtcagcgtctg
acattacctgccgaatga
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