KEGG   Pseudomonas fluorescens Pf0-1: Pfl01_5499
Entry
Pfl01_5499        CDS       T00283                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pfo  Pseudomonas fluorescens Pf0-1
Pathway
pfo00300  Lysine biosynthesis
pfo00470  D-Amino acid metabolism
pfo01100  Metabolic pathways
pfo01110  Biosynthesis of secondary metabolites
pfo01120  Microbial metabolism in diverse environments
pfo01230  Biosynthesis of amino acids
Module
pfo_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pfo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Pfl01_5499 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Pfl01_5499 (dapF)
Enzymes [BR:pfo01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     Pfl01_5499 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF SPO11_like
Other DBs
NCBI-ProteinID: ABA77236
UniProt: Q3K4R8
LinkDB
Position
6165723..6166553
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKMWGDRHTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKGGIIELDVRNDGQIGVNM
GAPRLVPADIPFQAPEQALSYQVDVDGTPVDLAAVSMGNPHAVLRVSDINTAPVHELGPK
IEHHPRFPARVNVGFLQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVLMTGPAVRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgttttaccaagatgcatggcctgggcaacgacttcatggttctcgacctg
gtcagtcagcacgcgcatattcagcccaagcacgcgaaaatgtggggcgaccggcacacc
ggcatcggtttcgaccagttgctgatcgtcgaggcgccaagcaatccggacgtggatttc
cgttaccggatcttcaactccgacggctccgaagtggagcagtgcggcaacggtgcacgc
tgcttcgcccgcttcgtgcttgataaacgcctgaccgccaaacggcagatccgcgtcgag
accaagggcggcatcattgagctggacgtgcgtaacgacggccagatcggcgtgaacatg
ggcgccccgcgcctggtgccggcggacatcccgttccaggcgccggagcaggccctgagt
tatcaggtcgatgtcgacggtacgccggtcgatctggcggcggtgtccatgggcaacccc
catgcggtgctgcgggtcagcgatatcaacactgcaccggtgcatgaactggggccgaaa
atcgaacaccatccgcgcttcccggcgcgggtcaacgtcggttttctccaggtcatcgac
cgccatcgcgcgcaactgcgcgtgtgggaacgcggcgccggggaaacccaggcctgcggc
accggtgcctgcgctgctgctgtagcggcgatcagtcaggggtggatggattcgccactg
ttgatcgacctgccgggcgggcgtttgtccatagagtgggcaggccccggccaaccggtg
ttgatgaccggcccggcagtgcgcgtatacgaaggacaagtgcgtctttga

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