Pseudomonas fluorescens Pf0-1: Pfl01_5499
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Entry
Pfl01_5499 CDS
T00283
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Pathway
pfo00300
Lysine biosynthesis
pfo00470
D-Amino acid metabolism
pfo01100
Metabolic pathways
pfo01110
Biosynthesis of secondary metabolites
pfo01120
Microbial metabolism in diverse environments
pfo01230
Biosynthesis of amino acids
Module
pfo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pfl01_5499 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pfl01_5499 (dapF)
Enzymes [BR:
pfo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Pfl01_5499 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
SPO11_like
Motif
Other DBs
NCBI-ProteinID:
ABA77236
UniProt:
Q3K4R8
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Position
6165723..6166553
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKMWGDRHTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKGGIIELDVRNDGQIGVNM
GAPRLVPADIPFQAPEQALSYQVDVDGTPVDLAAVSMGNPHAVLRVSDINTAPVHELGPK
IEHHPRFPARVNVGFLQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVLMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcatggcctgggcaacgacttcatggttctcgacctg
gtcagtcagcacgcgcatattcagcccaagcacgcgaaaatgtggggcgaccggcacacc
ggcatcggtttcgaccagttgctgatcgtcgaggcgccaagcaatccggacgtggatttc
cgttaccggatcttcaactccgacggctccgaagtggagcagtgcggcaacggtgcacgc
tgcttcgcccgcttcgtgcttgataaacgcctgaccgccaaacggcagatccgcgtcgag
accaagggcggcatcattgagctggacgtgcgtaacgacggccagatcggcgtgaacatg
ggcgccccgcgcctggtgccggcggacatcccgttccaggcgccggagcaggccctgagt
tatcaggtcgatgtcgacggtacgccggtcgatctggcggcggtgtccatgggcaacccc
catgcggtgctgcgggtcagcgatatcaacactgcaccggtgcatgaactggggccgaaa
atcgaacaccatccgcgcttcccggcgcgggtcaacgtcggttttctccaggtcatcgac
cgccatcgcgcgcaactgcgcgtgtgggaacgcggcgccggggaaacccaggcctgcggc
accggtgcctgcgctgctgctgtagcggcgatcagtcaggggtggatggattcgccactg
ttgatcgacctgccgggcgggcgtttgtccatagagtgggcaggccccggccaaccggtg
ttgatgaccggcccggcagtgcgcgtatacgaaggacaagtgcgtctttga
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