Pseudozyma flocculosa: PFL1_00619
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Entry
PFL1_00619 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PFL1_00619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfp03009
]
PFL1_00619
Ribosome biogenesis [BR:
pfp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PFL1_00619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
PQQ_3
BRX_assoc
HPS6
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
19314749
NCBI-ProteinID:
XP_007876303
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MSTNDVAAVAPAALALHRIRYLDWSPSTITSLAVSPVYRAASASSSASSSRGILAIGRQN
GDIELCVWLENRAAHKAEVLHRSFHTYAKGWIVHTLLPGQLNSKIEQLAFANPPVEGDNG
VHKLRLFSISGGAIVTEHFLPADIAILGAKSNNGSRSNTSSGNLGGLSTLFPGRADKSSA
DQHVPGAIRTVPSLGGAVWSMAVSPTGRYLAIGCEDGHARIIDLVDNKFEHLASSSNRGA
DVSARLGKAQGRIISLAWGPPKRASRAATTANGGSAQSKQQKEGDSSDSDSDSDSSDSDS
DDDDDDDAAESGWKETFLVGGLGNSSAAVWDVASGRIASKLTVQKARSEATIVWCVATLP
DGTIVTGDSTGRVTLFDAKTRVPIPGATFRSHTSGADVLSLCVGPDGKSLYSAGVDQKVA
EYALVASASSKRGRWVQIAARRLHAHDIRSLAIDPPYDPMLSVDALAQGVGTAVGKLPIL
LSGGVDFNLILTPASPPSGLTMALAAGAAAGLPNSNKRKKNPLMSAAEQEQALINPISSN
AVTTFADSTQRRIPFVPSTARSGSVGGGSVATVCRGKGWIVLRREHSIGIWDLGIKDENH
GGLNELGEEASAVPPQWTKLLEMELKVNSNLCSVAVSPNGKFLAASDMYETKLFALRERI
SQQHQTDLEPRKVKSFASVFGHDDDVAPGASALSFSPDSSRLVLASWSGSYVHVVELPSA
EAGASAGTCRLLRSFGQHRQRPGSASVGDVGASSNNPQGRQLAGRNGVAASKQNGSNGQG
HGNGSGSGSGDDAGHPARADDETGRRNSARGGQSDRVERSTSSLIHHVQISSDGAWLSTI
SSDLQHHVFSLDSLTFERTLPSPHALPSGSSFHPSTHAARSSMLTLVFSDNKIEFWDVES
GKELSSIAHLDTASSGDGSLGGSSGEKRKAGGGALAKRAGQGPRAEWEAQMANLKLRVQE
RLMSIRESAIGAVWVGKPDDGGIKETLVVWGPTWICTARHDAQSTTSPAAPAAASNGGSA
SVSRPAAAQDGDGDVEMADLPGSTSGAVSGTGPAAATAAAGVPGAGPGRGGGWHIKHTHK
YQPLLLVDSIATGRGQVKKDDLVVVERPFYELARNLPPAFHRGARYGA
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaaacgacgtcgccgccgtggcacccgccgccctcgccctccaccgcatccga
tacctcgactggtccccctcgaccatcacctcgctcgccgtctcgcccgtataccgtgcc
gcgtccgcatccagcagcgccagctcctccaggggcatcctcgcaatcggcaggcagaat
ggtgacatcgagctctgcgtctggctcgagaaccgcgcagcccacaaggccgaggtgctc
cacaggtcctttcacacctacgcaaagggttggatcgtgcacacgctcctccccggtcag
ctcaactccaagatcgaacagctcgcattcgcaaaccctcccgtggaaggcgacaacggc
gtacacaagctgcgcctcttctccatctcgggcggcgccatcgtcaccgagcacttcctc
cccgccgacatcgccatcttgggcgcaaagtccaacaacggctcccgatccaacacctcc
tctggcaacctcggaggcctatccaccctcttccccggacgagctgacaagtcgagcgcg
gatcagcacgttcccggagccattcgcaccgtcccctcgctcggaggcgccgtgtggagc
atggccgtgagccccacgggcaggtacctcgccatcggctgcgaagacggccacgcccgc
atcatcgacctggtcgacaacaagtttgagcacctcgccagctcctcgaaccgcggcgca
gacgtcagcgcccgcctcggcaaggcccagggacggatcatcagcctggcctggggccca
ccgaagcgggcgagtcgtgccgccaccaccgcaaatggaggtagcgcgcagtccaagcag
cagaaggagggcgacagctccgattccgattccgactctgactcgagcgacagcgacagc
gacgatgacgacgacgacgacgcagccgagagcggctggaaagagacgttcctcgtcgga
ggcctaggcaactcttcggctgccgtgtgggacgttgcaagcggccgcatcgcctccaag
ctgacggtgcagaaagctcgtagcgaggccaccatcgtctggtgcgtggcgacgctgccg
gacggcaccatcgtcactggagactcgactggccgagtcacgctcttcgacgcaaagacg
cgcgtccccatccccggcgccaccttccgcagccacacgagcggcgccgacgtcctctcg
ctctgcgtcggcccggacggcaagagcctctacagcgcgggcgtcgaccaaaaggtggcc
gagtacgcccttgtggcctcggcctcgtcgaagcggggccgctgggtccagatcgccgcg
cggaggctgcacgcccacgacattcgctcgctcgccatcgacccgccctacgaccccatg
ctctcggtcgatgcgctcgcgcagggagtgggcaccgccgtcggcaagctgccgatcttg
ctcagcggcggtgtcgacttcaacctgatcctgacgcccgcctcgcccccgtccggtctc
accatggccctcgctgctggcgctgcggccggtctgcccaacagcaataagcgcaagaag
aacccgctgatgtcggcggccgagcaggagcaggcgctcatcaaccctatttcgtccaac
gcggtcaccacatttgccgactcgacgcagaggaggatccccttcgtgcccagcaccgcg
cgcagcggctctgtcggtggcgggtccgtggccaccgtgtgccgcggcaagggctggatc
gtgctgcggagggagcacagcatcggcatctgggacctcggcatcaaggacgagaaccac
ggcggcctcaacgagctgggcgaggaggcgtcggctgttccgcctcagtggaccaagctg
ctcgagatggagctcaaggttaactcgaacctctgcagcgtcgccgtcagccccaacggc
aagttcctcgctgcctcggacatgtacgagacgaaactgttcgcgctgcgcgaacggatc
agccaacagcaccagacggacctcgagccgcgcaaggtcaagagctttgcgagcgtcttt
ggtcacgacgacgatgtcgcgccgggcgcgagcgcgctcagtttctcgcccgactcgtcg
cggctggtgctcgcttcgtggtcgggcagctacgtccacgttgtcgagctgccctcggcc
gaggccggcgcttcagcgggcacctgtcgcctcctccgcagctttggtcagcaccggcag
aggcctgggtcggcctcggttggagatgtgggggcatcttcgaacaacccgcagggcagg
cagctcgcgggacgcaacggagtcgcggcgtccaagcaaaacggaagcaacggacagggg
cacggcaacggcagcggcagcggcagcggcgacgacgccggtcaccctgcccgcgcggac
gacgagaccggccgcaggaacagcgctaggggcggccagagcgaccgcgtcgagcgcagc
acctcgtcgctgatccaccacgtccagatttcctcggacggagcctggctgtcgacgatt
tcgtccgacctgcagcaccacgtcttctcgctcgactcgttgacctttgagcggacgctg
ccgtcgccgcacgcgctgccttcgggctcgagcttccacccctcgacccacgcggcgcgc
tcgagcatgttgacgctcgtcttttcggacaacaagatcgagttctgggacgtcgagagc
ggcaaggagctgagcagcatcgcgcacctcgacactgcgtccagcggcgacggcagcttg
ggcggcagcagcggcgagaagcgaaaggccggcggtggcgccctggccaagcgggcaggg
cagggcccgcgcgccgagtgggaggcgcagatggccaacctcaagctccgcgtgcaggag
aggctgatgagcatccgcgagtcggccattggggcagtgtgggtgggcaagcccgatgac
ggtggcatcaaggagacgctcgtcgtctggggacccacctggatctgcacggcgcgccat
gatgcgcagagcaccacgtccccggctgcgcctgcggctgcctccaatggcgggtcagct
tcggtgtcgcggccagcagccgctcaagacggcgatggcgacgtcgagatggccgacctg
cctggctctaccagcggtgccgtctcgggaaccggtcccgcggctgctaccgctgctgct
ggagtgcccggtgctggcccaggtcgaggaggcgggtggcacatcaagcacacgcacaag
taccagccgctgcttctggtcgattcgatcgctacgggacgaggccaggtcaagaaggac
gatctggtggtcgtcgagaggcccttctacgagctggccaggaacctgccgcccgctttc
caccgtggagccagatacggcgcctag
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