Pseudozyma flocculosa: PFL1_02225
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Entry
PFL1_02225 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K22803
structural maintenance of chromosomes protein 5
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfp03400
]
PFL1_02225
DNA repair and recombination proteins [BR:
pfp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
PFL1_02225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
AAA_13
Motif
Other DBs
NCBI-GeneID:
19316346
NCBI-ProteinID:
XP_007877929
LinkDB
All DBs
Position
Unknown
AA seq
1185 aa
AA seq
DB search
MLSPPAAGANTSNMTQPLPSTSLRATQPSNSLSSTSAALSSPTQLSMKAEHLSQASAVPG
QKSGRKRPRDSSLPSSRRNAAAEAAVDDEDDDAADDDDDEQATRTRPRHHVEVSEADQQS
PPPSPSGNAQPGSRIVPLAQRSADGYLPGSIRRVALYQFVTFDFVEFRPGPHLNMIIGPN
GTGKSTISSGIALGLGWSTSVLSRQKDLADFVKSDCQEGWIELELQGLPGQANIVIRRTL
VKTDNTSDWFLNGRKSSKREVTERVGEFEIDISNLCSFLPQDKVAAFARMSSQEVLVETE
KTAGDANLFRWHTKLEELGKVLAAREAALEQDLKQRDNLKERNEALERDVRRFEEREKME
MTIFQLKCKILQVRHDAARAELEALKEAKSEVKARLRAAEEAGAPMKAQKDELKAEIRQA
DGWIRGQREAMHGEEKSITQLGREIDRRIGELDALHGEMQSLKTLEEQRKKNIRDLKAEI
AEREESIRAGPPEVDLSEIKKQLRSIDQEDRQAQDELYRVAALKNHILMESNNLARSRDE
LKARLESLADVKAQRLETLRRADPAAHTAVMWLRENQAMFQQPVYEPVLLEINVKDPAYA
NAVESCLNWPLMKTFVCQTRADYDLFTREVIDKRRMRVTVAEVENMELSKFRPPASPDQL
CALGLDKYVLELIDGPRDVLTHLCNTAHLHTIPVARDESRVDIERVEGSRLFRRFVIGST
TFTVTYSAYGNKAAQTASRFVTPARNLAGSINDRLKNQLDGQIRTIQQKIAEQEAQMAPL
IQSEASLRAERDDLAQRKAELQSEKRDKESVRSNWEKVKVVIEQKKKRLANEEQAPSVEA
KRLSCLQRRKKLVHLRAQVAQKLKAAALRMIKLQAGLDVRSLEKLQLAANLRHVESLVED
HRTALGELVSEKEEASRRLQIAVTHYKRIAEESHALANNDQGFVPELDDEIEDSLEDLQA
NLSRQQAAYENAQGIRPGVKEQFDERKKEIAALDNKIAKAESDKAALQRRLELTKSKWQP
ALAELVSRISEKFSAAFDSIGCAGEVRIKEAEKFEDWGIEILVKFRDEASLQVLTGQQQS
GGERSLSTIMYLMSLTELSRSPFSLVDEINQGMDQRAERSVHNHMVDVTCKDSASQYFLI
TPKLLTDLRYHEKMKILVVNNGDWASKPIGLRKYATKALRTNGNQ
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcccgccggctgccggtgcaaacacatccaacatgacgcagccgcttccatcg
acctctctccgggccacccaaccttcaaactctctctccagcacaagcgccgccctctcg
tctccgacgcagctttccatgaaggccgagcacctctcacaggcatcggccgtccctgga
caaaagagtggccgtaagcgacctcgcgactcatcgctcccctcttcgcgccgcaacgct
gctgcagaagctgccgtggacgacgaagacgatgatgctgcagacgacgacgacgacgag
caggccacgcgaacgcgcccgaggcatcacgtcgaggtgtccgaggcagatcagcagagc
ccaccacccagcccctctggtaatgcgcagcccggctctcgcatcgtcccgctcgctcag
aggtccgccgacggctacctgcccggctcgatccgcagggtggcgctgtaccagtttgtc
acgttcgactttgtcgagttccgacccggtccacacctcaacatgatcatcggcccaaac
gggacgggcaagagcaccatctcctccggcatcgccttgggcctcggatggtccacctcg
gtcctgtcccgccaaaaggacctggcagactttgtcaagagcgattgccaggagggttgg
atcgagctcgagctgcagggactgcccggccaggccaacatcgtcatccgccgcacgctc
gtcaagaccgacaacaccagcgattggttcctcaacggtcgcaagtcgtcgaagcgagag
gtcacggagcgtgtcggcgagttcgagatcgacatctccaacctgtgttccttccttccg
caggacaaggtggccgcctttgcacgtatgagctcgcaagaggtcctcgtcgagacagag
aagacagccggcgacgctaacctcttcaggtggcacaccaagctcgaggagctcggcaag
gtccttgcggcgagggaggccgcgctcgagcaagacctcaagcagcgcgacaacctcaag
gaacgcaacgaggcgctcgagagggacgtgcgccgattcgaagagagggaaaagatggag
atgaccatcttccagctcaagtgcaagatcctgcaggtcaggcacgacgcggcgcgcgcc
gaactcgaggcgctcaaagaagcaaagtccgaggtcaaggcgcgcctgagggcggcagaa
gaggccggcgcgccgatgaaggcgcaaaaggacgagctcaaggccgagatcaggcaggcg
gacggctggatccgagggcagcgcgaggccatgcacggcgaagaaaagtccatcacccag
ctgggcagggagatcgaccgccgcatcggcgagctcgatgctctccacggtgagatgcaa
agcctgaagaccctggaagagcaacgcaagaagaacatcagagacctcaaggcggaaatc
gcagagcgagaggagtcgatccgtgcagggccgcccgaggtcgacctctccgagatcaag
aagcagctgaggtcgatcgatcaagaagaccgacaggcgcaggacgagctctacagggtc
gcagctctcaagaaccacatcttgatggagagcaacaacttggcacgttcacgcgacgag
ctcaaggcgaggctcgaatccctcgcagacgtcaaggcccagcggctcgagacactgcga
cgagccgatcccgcagcccatacggccgtcatgtggttgcgcgaaaaccaggccatgttt
cagcagccggtctacgagcccgtcctcctcgagatcaacgtcaaggatccggcgtacgcc
aacgcggtcgaatcgtgcctcaactggcccctgatgaagacgttcgtctgccagacacgc
gccgactacgacctcttcacccgagaggtgatcgacaagcgaaggatgcgggtcacggtg
gccgaagtcgaaaacatggaactctcgaaattccgaccgccagcgagccccgaccagctc
tgtgccctcggcctcgacaagtacgtgctcgagctcatcgatggacccagggatgtcctc
acccacctctgcaacacggcgcatctgcacaccatcccggtcgcccgggacgagtccagg
gtcgacatcgagcgcgtggagggctcgcgcctcttccgacgcttcgtcatcggcagcacg
actttcaccgtcacgtactcggcctacggcaacaaggcggcacagacggcatcgcgcttc
gtgacgccagcgcgcaacctcgcgggatccatcaacgacaggctgaagaatcagctcgac
ggccagattcgcaccatccagcagaaaatcgccgagcaggaggcacaaatggctccgttg
atccagagcgaagcctcactcagagcggaaagggacgaccttgctcaacgcaaggcagag
ctccagagcgagaagcgcgacaaggagagcgtcagaagcaactgggagaaggtcaaggtt
gtaattgagcaaaagaagaagcggcttgcaaacgaagagcaggcgccgagcgtcgaggcc
aaacgcctcagttgccttcaaaggagaaagaagctcgtccacctgcgcgctcaggtggca
cagaagctgaaggccgccgcgctgcggatgatcaagctgcaggcggggctggacgtccgg
agcctcgagaaactgcaactggcggccaacctgcgtcatgtcgaaagcctcgtcgaagac
caccgcaccgctctcggcgagctcgtcagcgaaaaggaggaggcctcgcgaaggctgcag
atcgccgtgacgcactataagcgcatcgccgaagagtcacacgcgcttgcgaacaacgac
caaggattcgtgccggaactggatgacgagatcgaagacagtctcgaagatctgcaagcc
aatctgtcgcgacagcaggcggcctacgagaacgctcaaggcatccgcccgggcgtcaag
gagcagttcgacgagcgcaagaaggagattgccgcgctcgacaacaagattgcaaaggca
gagagcgacaaggctgcgcttcagcgcaggctcgagttgacaaagtcgaagtggcagccg
gcgctggctgagcttgtgtcgcggatcagcgagaagttctcggcggctttcgacagcatc
ggctgcgcaggtgaagtgcgcatcaaggaggccgaaaagttcgaggactggggtatcgag
atcctcgtcaagttccgggacgaggcctcactgcaagtgctcaccggtcagcagcaatcc
ggcggcgagcgttcgctgtccaccatcatgtacctcatgtcgctcacggagctgtcaagg
agccccttctcgctcgtcgacgagatcaaccaggggatggaccaacgggccgagaggagc
gtgcacaaccacatggtcgacgtcacatgcaaggattcggcctcgcagtacttcctcatc
acgccaaagctgctcaccgaccttcgctaccacgagaagatgaagattctcgtcgtcaac
aacggggactgggcgtccaagccaatagggcttcgcaagtatgccaccaaggcgctcagg
accaacggcaatcagtga
DBGET
integrated database retrieval system
