KEGG   Pseudozyma flocculosa: PFL1_03095
Entry
PFL1_03095        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K07466  replication factor A1
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03030  DNA replication
pfp03420  Nucleotide excision repair
pfp03430  Mismatch repair
pfp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PFL1_03095
   03420 Nucleotide excision repair
    PFL1_03095
   03430 Mismatch repair
    PFL1_03095
   03440 Homologous recombination
    PFL1_03095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pfp03000]
    PFL1_03095
   03032 DNA replication proteins [BR:pfp03032]
    PFL1_03095
   03400 DNA repair and recombination proteins [BR:pfp03400]
    PFL1_03095
Transcription factors [BR:pfp03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    PFL1_03095
DNA replication proteins [BR:pfp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    PFL1_03095
DNA repair and recombination proteins [BR:pfp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     PFL1_03095
   MMR (mismatch excision repair)
     PFL1_03095
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     PFL1_03095
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N tRNA_anti-codon DUF223 CDC24_OB3 Ribosomal_L37ae IBR
Other DBs
NCBI-GeneID: 19317206
NCBI-ProteinID: XP_007878802
UniProt: A0A061HBD0
LinkDB
Position
Unknown
AA seq 619 aa
MSLSDLTQGAIARMVESTDTSNGVQNPVCQILSIKKISSTSTANPNVGDRYRIILSDGVH
FAQAMLASQKRQMAENGEIDRNSVVRVLQYSSNNVQNRRILILLDLEVIGGPTPERLGAP
KALEDQARPAGAGAPVKQENGATAPATSYGGAGAGASAGSTKPAMGGRPGGSSMNAGLPI
YPIEGLSPYQNKWTIKARVTSKSDIRHWSNQRGEGKLFSVKLLDESGEIKATGFNDAVDR
FYGLLQENKVYLISKAKVSIAKKQFSNLSNEYEIMFENSTEIEECTDASDVPEVKYEFVP
IDQLENVEPNQTCDVIGVLESYGEVSEIVSKASQRPVSKRELTLVDQSGRSVRLTMWGKS
AENFPQNQGVDDKPVIAVKGVKVGDFGGRSLSMFGSSTMMVNPDIPESHGLRGWYDNDGA
TANFKPYSNVGMAGAGGAGAGGNLAERRSIAQVRDENLGMSEKPDYFNIRATIVYIKQDN
LWYTACPSDSCNKKVNQENDGLWRCEKCDKSFEEPQYRYLLSTNVADMSGQMWLSGFNDD
AEQIIGKTASELYQIREENESEYTAVLHRAANRMYMFNCRAKQDTFNDTTRVRYTISRAA
PVDFAKAGHELAEAIKAYL
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgtcgctttcggacctcacgcagggcgccatcgcccgcatggtcgagagcacggatacc
agcaacggagtgcagaaccccgtctgccagatcctcagcatcaagaagatctcttcgact
tccaccgccaacccaaatgtcggagaccgctaccgcatcatcctctccgacggagtccac
tttgcccaagcgatgctcgcctcgcagaagcggcaaatggccgagaatggcgagattgac
aggaactcggtggtgcgcgtgctgcagtactcaagcaacaacgtccagaaccgccgcatc
ctcatcctcctcgacctcgaggtgattggcggcccgacacccgagaggctcggcgcaccc
aaggcgctcgaagaccaggcgcggcccgcgggtgccggcgcgcccgtcaagcaggagaat
ggcgccaccgcgcccgccacgtcgtacggaggcgccggcgctggcgccagcgccggttcc
accaagccggccatgggcggccgaccgggaggctcgagcatgaacgccggcctgcccatc
tacccgatcgagggcctgtcgccctaccagaacaagtggaccatcaaggcgcgcgtcacg
tcaaagtccgacatccgacactggagcaaccagcggggcgagggcaagctgtttagcgtc
aaactgctcgacgagagcggcgaaatcaaggcgaccggcttcaacgacgccgtcgaccgc
ttctacggcctgctccaggagaacaaggtgtacctcatcagcaaggccaaggtcagcatc
gccaagaagcagttcagcaacctcagcaacgagtacgagatcatgtttgagaactcgacc
gagatcgaagagtgcaccgacgcgagcgacgtgccagaggtcaagtacgagtttgtcccc
atcgaccagctcgaaaacgtcgagcccaaccagacgtgcgacgtcatcggcgtcctcgag
agctacggcgaggtgtccgagatcgtctccaaggcgtcgcagcggccggtgtcgaagcgc
gagctgacgctggtggaccagtcgggccgcagcgtccgcctgaccatgtggggcaagtcg
gcggaaaacttcccgcagaaccagggcgtcgacgacaagcccgtcatcgccgtcaagggc
gtcaaggtgggcgactttggcgggcgcagcctgagcatgtttggcagctcgacgatgatg
gtcaacccagacattcccgagtcgcacggcctgcgcggctggtacgacaacgacggcgcc
acggccaactttaagccgtacagcaacgtgggcatggcgggcgccggcggcgcgggagcc
ggaggcaacctggccgagcggcgctccatcgcccaggtgcgcgacgagaacctgggcatg
agcgagaaacccgactacttcaacattcgcgccacgattgtctacatcaagcaggacaac
ctgtggtacacggcctgcccgtcggactcgtgcaacaagaaggtcaaccaggagaacgac
gggctgtggcggtgcgagaagtgcgacaagagcttcgaggagccccagtaccgctacctg
ctttcgaccaatgtcgccgacatgagcggccagatgtggctcagtggcttcaacgatgat
gccgagcagatcattggcaagacggccagcgagctctaccagattagggaggagaacgag
agcgagtacacggccgtccttcaccgcgcggccaaccgcatgtacatgttcaactgccgc
gccaagcaggacacattcaacgacacgacgagggtgcgatacaccatcagccgcgccgcg
cccgtcgactttgcaaaggcgggccacgagctggccgaggccatcaaggcttacctctag

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