Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_08950
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Entry
PFREUD_08950 CDS
T01252
Symbol
recO
Name
(GenBank) DNA repair protein recO (Recombination protein O)
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Pathway
pfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PFREUD_08950 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfr03400
]
PFREUD_08950 (recO)
DNA repair and recombination proteins [BR:
pfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PFREUD_08950 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PFREUD_08950 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
RecO_N_2
Motif
Other DBs
NCBI-ProteinID:
CBL56421
UniProt:
D7GD10
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All DBs
Position
1013055..1013798
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AA seq
247 aa
AA seq
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MPTYRDEAVVLRTHKLGEADRIITLLSRTHGKVRAVARGVRRTSSKFGGRLEPCNHVDVQ
FAVGRSLDIVTQVECLHPYGDPLTRDYVLYTTGETMLEVADRLVAVENEPSLQQYRLLVG
ALRVLGQGTSDGPRPATMVLDSYLLRSLAVAGYAPVLDSCAKCGVMGQQEWFSPSIGGMV
CSGCRPPGSARPEPESWQFLGALMSGDWPATRTVGEGTQREVSGLIAAFSSWHLEHQLRS
LPLIPRG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtgcccacctatcgtgatgaagccgtcgtgctgcgaacccacaagctgggcgaggccgac
cgcatcatcaccctgctgagccgcacgcacggcaaggtgcgggccgtggcgcgcggggtg
cgacgcacatccagcaagttcggcggcaggctcgagccgtgcaaccacgtggacgtgcag
ttcgcggtgggccgcagccttgacatcgtgacgcaggtggaatgcctgcatccctatggt
gatcccctcaccagggactatgtgctctataccaccggcgagacgatgctcgaggtggcc
gaccgcttggtcgcggtggagaacgagccctcgctgcagcagtaccgactgctcgtgggg
gccctgcgggtgctcggacagggcaccagcgatggaccgcgcccagcgacgatggtgctg
gattcctatctgttgcgatccctggcggtggccggctacgcccccgtgctggattcctgc
gccaagtgcggcgtgatggggcagcaggagtggttctcgccctccatcgggggcatggtc
tgctcgggttgccgtccacccggctcggcgcgcccggagcccgaatcgtggcagttcctc
ggggccctcatgagcggggactggcccgccacgcgcaccgtcggtgagggcacccaacgc
gaggtgtccgggctgatcgcggccttctcgtcatggcacctggagcaccagctgcgctcg
ctgcccctcattccccgcggctga
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