Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_09810
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Entry
PFREUD_09810 CDS
T01252
Name
(GenBank) ATP-dependent DNA helicase
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DUF2800
AAA_30
Dna2
AAA_16
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CBL56506
UniProt:
D7GD95
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Position
1101012..1104383
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AA seq
1123 aa
AA seq
DB search
MSFQLLDQQRAFVEACARPHGAVLALGGPGVGKTTALVEAVAQRVEAGAHMDRLVVLTWS
RPAAQRLRARIVARLASSQLAPVITTVPGWCLALQRRFGHLDADGQLPHVLTGPEQQMQV
RELVVQLGRDLWPESVRAAIATMAFSQELRTGMARARQQGLDPDDLVRLGRRTGREEWVS
MGLFFENYLDVLDAQPAWDYAELVHRTRLLLLEAPVSSVLTEEIEGVFCDEFAELDRSQI
ALLEQVHQVGIPVAATADPQSSVFAFRGADPRAVADFGRRFEVTGLPGPERIDLSTSLRG
TAGLQRGIASLIARNPVAGGGSGTRPHEAGAVSGADRAEQIVCRSYETAAAEIAGVAEDL
RTARLAGVMWSQQAVICRAGRGQLGTIARGLANQGIPVEVAGSDIALSEQACVVTLMDAL
AVALGFSRRVPPDPDQLDRLLLSPLTSLDPTALRRVGGALWHEAASGTTSDPMTLVRQFL
MRRAGDHLPSPVVPPATAQDVGALVHRPDTSGAAPTDVTTPPTGPTAQTATSALPTDPDL
EPVRELAALLGDAAARIMRGEGAYDVLWRLWDGTDWPSRLRGEALSGSASSGQANSDLDA
VLALFDVAARHMELTGQKGAETLIAEVSGQEIPGDQARESDPRGRGVQVLTAHRAKGLEW
DRVIIMGAAEGSWPGNRRGAGLLSAELLDADDPGLAPAPGAWMQQERRAFVLAASRARKE
LVITANLGSGDEQAQASRFVRELGGQVLAVPHDTRRPRSLQGLVGELRRVTADQRSTAGL
REAAAHQLGQLAVVRDDQQRALVPGADPRSWWGLGGLSGRHGTPSPAGVGEPEGPTRDKA
IRLSVTGLQKLIACPRQWFLDVAARGATTGGFAAGVGSVIHLLAEHAVTDHLSEDQLHDA
LDEAWNDLDVHQQGWRTLIERSRAHEMITRFERWQGGQPTEVLGVEVPVRHTFVIGGQPL
ELVGSIDRLERDRTSGRIRIIDFKTGSRAPSRTEAASNLQLAAYQLAVMRGACRELTGST
PAMDGALLVFLRLPAGARDPLLLKVVGQPGLDDHPYPAAEQLANTWLVRGDVDIQGPTMV
DDALAFAVHCVVEEDYPAVEGPPCSYCDHRADCPIWAREASSR
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccagctgctcgaccagcagcgcgcgttcgtcgaggcgtgcgcccggccccac
ggcgctgtgctcgcactcggcgggccgggcgtgggcaagaccaccgcactggtcgaggcg
gtggcgcaacgcgtggaggcaggggcgcacatggatcgcctcgtcgtgctcacctggtcg
cgtccggcagcacagcgcttgcgtgcacgcatcgtggcccggctggcgagcagccagttg
gcgccggtgatcaccacagtccccggttggtgcctcgccctgcagcgccggttcggccac
ctcgatgccgacggccagttgccccatgtgctcaccggacctgagcagcagatgcaggtg
cgcgagctcgtggtgcaactcggccgggacctgtggcccgaatcggtgcgtgcggccatc
gccacgatggccttttcgcaggagctgcgcaccggcatggccagggcgcggcagcaggga
cttgatcccgacgacctggtgcggctgggccggcgcacggggcgtgaggagtgggtgagc
atgggcctgttcttcgagaactaccttgacgtgctcgatgcccaacccgcctgggactac
gccgaactcgtgcaccgcaccaggttgctcctgctggaggcgccggtcagctcggtgctg
accgaagagatcgagggggtcttctgcgatgagttcgccgagctcgaccgctcccagatc
gcactgctcgaacaggtgcatcaggtgggtattccggtggctgccaccgcagacccgcaa
tcgtcggtctttgccttccgtggtgccgatccgcgcgccgtggccgacttcgggcgtcgg
ttcgaggtcaccggcctgccggggccggagcggatcgacctgtccacgtcactacgcgga
accgccggtctccaacgaggcatcgccagcctgatcgcgcgcaatccggtcgccggtggc
ggatcgggcacccggccccacgaggcaggggcggtctccggggcagaccgggccgagcag
atcgtgtgtcgcagctacgagacggcggcggccgagatcgccggtgtggccgaagacctg
cgaacagcgaggctggccggggtcatgtggtcgcaacaggcggtcatctgccgggccggt
cgcggccagttgggcaccatcgcgcgggggctggccaatcaggggatcccggtggaagtg
gcgggcagtgacatcgccctgagcgaacaggcctgtgtcgtcaccctgatggatgcgctg
gccgtcgcgctgggtttctcccgccgggtaccgcccgatcccgatcagcttgaccggctc
ctgctgtccccgttgacatcccttgacccgaccgcgctgcggcgcgtcgggggagccctg
tggcacgaggccgcgtcgggtacgacatcggatccgatgacattggtccgccagttcctc
atgcgtcgggcgggtgatcacctgccgagcccggtggtgcccccggcgacggcgcaggac
gtcggggcgctcgttcaccgtccggacacctccggggcggctccgacggatgtcacgaca
ccgcccacggggcccacggcccagaccgcaacgtcggccctgcccaccgacccggacctg
gaaccggtccgggaactggcggcgctgttgggcgacgccgcggcgcgcatcatgcgtggc
gagggggcctacgacgtgttgtggcggctgtgggacggcactgattggccctcccggctg
cggggcgaggcgctatcgggttcggcctcctccggacaggcgaacagcgaccttgatgcc
gtgttggccctcttcgacgtcgccgcgcggcacatggagctcacgggtcagaagggcgcc
gagaccctgatcgctgaggtctcgggccaggagatccccggtgaccaggcacgcgaatca
gatccccggggccggggagtgcaggtgctcaccgcccaccgggccaaggggcttgagtgg
gatcgcgtcatcatcatgggcgctgcggagggatcgtggccgggtaatcgccgtggagcc
gggctcctgtcggcggaattgctcgacgccgacgacccggggctggcaccggcgcccggg
gcgtggatgcagcaggagcggcgggcgttcgtgctggccgccagtcgtgcccgcaaggaa
ttggtcatcacggcaaacctgggttccggtgacgagcaggcacaggcatcgcgtttcgtg
cgggagctcggcggccaggtccttgccgtgccacacgacacccgacgcccccggtccctt
cagggactggtcggtgagctgaggagggtcaccgccgatcaacgctcgaccgcgggactc
cgggaggcggccgcccaccaactgggccagctcgccgtggtgcgtgacgaccagcaacga
gcccttgtgccgggggcggatccccgcagttggtggggactcggcgggctgtcaggccgt
catgggacaccctccccggccggcgtgggggagccggagggcccgacccgggacaaggcc
atccgcttgtcggtcaccggcctgcagaagctcatcgcctgtccccggcagtggttcctc
gacgtagcggcgcgcggcgccaccacaggcgggtttgcggcaggcgtcggatcagtgatc
catctcctcgccgaacatgccgtgaccgatcacctcagtgaggaccagctccatgacgcc
ctcgacgaggcctggaatgacctcgacgtccaccagcagggttggcgcacgctcattgag
cgttcccgggcgcacgagatgatcacccggttcgaacgatggcagggcggccaacccacc
gaggtactcggcgtcgaggtgccggtcaggcacacattcgtcatcggcggacagccactc
gaactggtgggatcgatcgatcggctcgagcgcgaccggacctcgggccgcatccggatc
atcgacttcaagaccgggagccgggcacccagtcgcaccgaggcggcatccaatctgcag
ctcgccgcctaccagctggcagtaatgcgcggcgcgtgccgcgaactgaccggctcgacc
cccgccatggatggcgccctgctggtgtttctgcggctgccggcgggcgcacgcgacccg
ctgctgctcaaggtggtgggacaacccggccttgacgaccatccctacccggccgccgaa
cagctggcgaacacctggctggtgcgcggtgacgtggacatccaggggccgaccatggtg
gacgatgcactggccttcgccgtccactgcgtggtcgaggaggactacccggcagtcgag
gggccgccctgcagctactgcgaccaccgtgccgactgcccgatctgggcccgggaggcg
agttcacgatga
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