Pseudomonas fluorescens SBW25: PFLU_3138
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Entry
PFLU_3138 CDS
T00899
Name
(GenBank) Uncharacterized protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PFLU_3138
09124 Replication and repair
03420 Nucleotide excision repair
PFLU_3138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfs03021
]
PFLU_3138
03400 DNA repair and recombination proteins [BR:
pfs03400
]
PFLU_3138
Enzymes [BR:
pfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PFLU_3138
Transcription machinery [BR:
pfs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PFLU_3138
DNA repair and recombination proteins [BR:
pfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PFLU_3138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAI2797357
UniProt:
C3KBE6
LinkDB
All DBs
Position
1:complement(3427473..3429728)
Genome browser
AA seq
751 aa
AA seq
DB search
MSYNVAVRALCEFTAKVGDLDLRFTPSPSAQEGIVGHRTVASRRSPHYQNEVALEGEYQQ
LKVRGRADGYDPDANRLEEVKTYRGDLDAQPANHRQLHWAQVKVYGWLMCQKLGLSQIDL
ALVYFDIVGEGETVLNQHFHASELEPFFNQQCALFLGWAQQEMAHREARNRAAQALAFPH
AGFRPGQRSLAESVYKAVSTGRCLMAQAPTGIGKTIGTIFPLLKALAPQQLDTLFFLTAK
TPGRKLALDAAHVLHTSSPELQLRVLELVARDKACEHLDNACHGDACPLAKGFYDRLPAA
RIAASKVRLLDQRNLRDVALAHDVCPYYLSQEMARWADLVVADYNYYFDFGAMLFGLAQL
NQWRAAVLVDEAHNLVERARSMYSASLDQYHLKTLRDVAPEPLKKPLQRLNREWNALHKD
QIAPYQAYAARPEKLLQALSLCASSMGEYFNEHPESLSGDLQAFYFEVLQFAKVAELFNE
HFIFDISKRQLSGKRSSSTLCLRNVVPAEFIRPRLTAARSSVLFSATLSPRHYYADLLGL
PADTAWIDVESPFKAEQLQVRIVDAVSTRFVHRHASLEPIVELIARQYTGQPGNYLAFFS
SFDYLQQVAQLLAERHPQITLWQQSRGMAEAERQAFLDQFTEHSQGVGFAVLGGAFGEGI
DLPGARLIGAFIATLGLPQLNPVNEQMKLRMGAIFGSGYDYTYLYPGIQKVVQAAGRVIR
SQQDRGVVMLIDDRFGEARVRQLLPRWWAVA
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
ttgagttacaacgttgccgtgcgtgcactgtgtgagttcacggccaaggtcggtgacctg
gacctgcgcttcacgccgtcgcccagcgcccaggaaggcattgtcggccaccgcaccgtc
gcctcgcggcgcagcccgcactaccagaatgaagtggcgctcgaaggtgagtaccagcaa
ctcaaggtgcggggcagggcggacggctacgacccggacgccaaccgcctggaagaagtg
aaaacctatcgcggcgacctcgacgcccaacccgccaaccaccggcaactgcattgggcc
caggtcaaagtgtacggctggttgatgtgccagaaactcggcctctcgcagatcgacctg
gcgctggtgtacttcgacatcgtcggcgagggcgagacggtgctcaaccaacacttccac
gccagcgaactggagccgttcttcaaccagcaatgcgcgctgttcctcggttgggcccag
caggaaatggcgcaccgcgaagcgcgcaacagggccgcgcaggccctggcgtttccccat
gccggttttcgtcctggccagcgctcgcttgctgaatcggtgtacaaggccgtcagtacc
ggccgctgcctgatggcccaggcgcctaccggcatcggcaagaccatcggcacgattttc
ccgttgctcaaggccctggcgccccagcaactggacacgctgttcttcctcaccgccaaa
acccccggccgcaagctcgccctggacgccgcccacgtgctgcacaccagcagccccgag
ctgcaattgcgcgtcctggagctggtggcgcgggacaaagcctgcgagcacctggacaac
gcctgtcacggcgacgcctgtcccttggccaagggtttctacgatcgcttgcccgccgcg
cgcatcgccgcgtccaaggtgcgcctgctggaccagcgcaacctgcgcgacgtggccctg
gcccatgacgtctgtccctattacctgagccaggaaatggcgcgctgggccgacctggtg
gtcgccgactacaactactatttcgattttggcgccatgctgttcggcctggcccagctc
aaccagtggcgcgcggcagtgctggtggacgaggcgcacaacctggtcgaacgggcccgc
tcgatgtacagcgcgagcctcgaccaataccacctcaagaccctgcgcgacgtcgcgccc
gagcccttgaaaaaacccttgcagcgcctcaaccgtgagtggaacgcactgcacaaggac
cagatcgcgccctaccaggcttatgccgcccgcccggaaaaactgttgcaggccctgagc
ctgtgcgccagcagcatgggcgagtatttcaatgagcatcccgaatcgctcagcggcgac
ctgcaagccttctatttcgaggtgctgcaatttgccaaagtcgccgagctgttcaacgaa
cacttcattttcgacatcagcaaacgccagctcagcggcaaacgcagcagctcaaccctg
tgcctgcgcaacgtggtgcccgccgaattcatccgcccacgcttgaccgcggcccgcagc
agcgtgctgttttccgcgaccctgagcccccgtcattactacgcggatttgctcggtttg
ccggcggacacggcctggatcgatgtggagtcgccgttcaaggccgagcaattgcaggtg
cgcatcgtcgatgcggtctccacgcgtttcgtgcatcgccacgcctctttggaacctatc
gttgagctgatcgcccgccaatacaccgggcagcctggcaactacctggcgttcttctca
agcttcgattacctgcagcaggtggcgcagttgctggccgagcgacacccgcagatcaca
ctctggcaacagtcacgcggcatggccgaggccgagcgccaggcgttcctcgaccaattc
accgaacacagccagggtgtcggctttgccgtgctcggcggcgcctttggtgaaggcatc
gacctgcccggcgcccgtttgatcggcgccttcatcgccaccctcgggttgccccaactc
aacccggtcaatgaacagatgaaactgcgcatgggcgcgatcttcggttcaggctacgac
tacacctacctgtaccccggcattcagaaagtggtgcaggcagcgggcagggtcatccgc
agccagcaggaccgtggcgtggtgatgttgatcgatgaccgcttcggcgaagcgcgggta
cggcagttgttgccgcgttggtgggcggttgcatga
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integrated database retrieval system
