Pyrococcus furiosus DSM 3638: PF0258
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Entry
PF0258 CDS
T00075
Name
(GenBank) putative endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pfu
Pyrococcus furiosus DSM 3638
Pathway
pfu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PF0258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfu03400
]
PF0258
Enzymes [BR:
pfu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
PF0258
DNA repair and recombination proteins [BR:
pfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PF0258
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Amidohydro_1
DUF2345
Motif
Other DBs
NCBI-ProteinID:
AAL80382
UniProt:
Q8U437
LinkDB
All DBs
Position
complement(264702..265547)
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AA seq
281 aa
AA seq
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MFKIDRLRFGTAGIPLSTPKPSTIAGIERVRELGLDAMELEFVRGVNIRPELAKKIKYVA
KKNDVVLTAHAPYYINLNAKEKEKVESSKRRIIQSAERLYEAGGWSVVFHAGYYLKEHPE
KVYQKIESTLKDIERELKDRGIEVWLRPELTGKPTQFGDLKELIKLSQNLELVLPAIDFA
HAHARNKGKCNSEEEWREMLALIENELGREALDNMHIHISGIEYTEKGEKRHLNLEESDL
KWEDLLKVLKEFKVKGVVISESPNIEGDALLMKKKWEELKI
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaattgataggctaagatttggaactgctggaatacctctttctactccaaaa
ccttctacaatagctggaattgaaagggttagagagcttggactagatgccatggagctt
gaatttgtgagaggagtaaatataaggcccgaactggcaaagaaaataaaatacgtagca
aaaaagaacgacgttgttttaacagcgcatgccccatactacataaacttaaacgccaaa
gagaaggaaaaagtggaaagtagcaaaaggagaattattcagagtgcagaaaggctatat
gaggcaggaggatggagcgtagtttttcatgctggctattacttgaaagaacatccagaa
aaggtttatcagaaaattgaaagcacactaaaggatatagagagagaattaaaggacagg
ggaatagaagtctggctgagacctgagttgacgggaaagccgacccaatttggagatctg
aaagaattaattaaattaagtcaaaacctagagcttgttcttcccgcaatagactttgcc
catgcccatgcgaggaataagggaaagtgtaactctgaagaagagtggagagagatgcta
gctttaattgaaaacgagcttgggagagaggcattagataacatgcatattcacataagt
ggaattgaatacacagaaaagggagaaaagaggcatctcaatctagaggagagcgatctt
aaatgggaagatctactcaaagttctcaaagaatttaaagttaagggcgttgtaataagt
gagagccccaatatagaaggggatgctctgcttatgaagaaaaaatgggaggagctaaaa
atttaa
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