Pseudomonas fulva: Psefu_4113
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Entry
Psefu_4113 CDS
T01501
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pfv
Pseudomonas fulva
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfv03019
]
Psefu_4113
03009 Ribosome biogenesis [BR:
pfv03009
]
Psefu_4113
Messenger RNA biogenesis [BR:
pfv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Psefu_4113
Ribosome biogenesis [BR:
pfv03009
]
Eukaryotic type
Pre-60S particles
RNases
Psefu_4113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AEF24068
UniProt:
F6AJX6
LinkDB
All DBs
Position
complement(4480504..4481073)
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AA seq
189 aa
AA seq
DB search
MSGLLEERSMQNPQNLIWIDLEMTGLDPETDVIIEMATIVTDSELNVLAEGPVIAVHQSD
ERLAAMDEWNTRTHGESGLTQRVRDSKISQAEAEAQTIAFLERWVPKGKSPICGNSIGQD
RRFLYKYMPALEAYFHYRYLDVSTLKILAERWAPGVKEGFVKTGTHQALDDIRESIAELK
YYRQHLLRV
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcctattggaggagcgcagcatgcagaacccacagaatctgatctggatcgac
ctggaaatgaccggactcgatcccgagacggacgtcatcatcgagatggcgaccatcgtc
accgacagcgaactcaatgtgcttgccgaaggcccggtgatcgccgtgcaccagagcgac
gagcgcctggcggccatggacgagtggaacacccgtacccatggcgaaagcggcctgact
caacgcgtgcgcgacagcaagatcagccaggccgaagccgaggcgcagaccatcgccttt
ctggaacggtgggtgccgaagggcaagtcgccgatctgcggcaacagcatcggccaggat
cgccgcttcctctacaagtacatgccggcgctggaagcctacttccactaccgctatctg
gatgtgtcgaccctgaagattctcgccgagcgctgggcgccgggcgtcaaggaaggcttt
gtgaaaaccggcacgcaccaggcgctggacgacatccgcgagtccatcgccgagctcaag
tactaccgccagcacctgctcagggtgtga
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