Pseudomonas simiae PCL1751: PF1751_v1c45330
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Entry
PF1751_v1c45330 CDS
T03766
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PF1751_v1c45330 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfw03400
]
PF1751_v1c45330 (xseA)
Enzymes [BR:
pfw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PF1751_v1c45330 (xseA)
DNA repair and recombination proteins [BR:
pfw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PF1751_v1c45330 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF4807
Motif
Other DBs
NCBI-ProteinID:
AJP54228
LinkDB
All DBs
Position
5032115..5033494
Genome browser
AA seq
459 aa
AA seq
DB search
MIKDPFARLGLDREVLTVSQLNGRARVLLEDVFTNIWVEGEISNLARPASGHVYFTLKDS
GAQVRCALFRNNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAF
DALKEKLSAEGLFSAERKVPLPAHPRRIGIISSPTGAVIRDIISVFRRRAPNIELTLIPT
AVQGREAIPQIVRALKLADARGFDALILARGGGSLEDLWCFNEEAVARAVDACVTPIVSA
VGHETDVSISDFVADVRAPTPSAAAELLAPDASHLVRQVENLHRRLVMLMRNRLSHDRLR
LEGMARRLRHPGERLRQQAQRLDDLDMRLRRAFERSLNTRRERLIRLETRLAGQHPGRQL
ALLRQRLDSLAERLPRAMREGLKSRRLQLQSQMQTLHVVSPLATLGRGYSILLDERGQAI
RNAAQTHTGQRLTARLGEGQLQVRVEDNHLTPVTLSLLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagatccttttgcccgcctgggcctggaccgcgaagtcctgactgtcagccag
ctcaacggccgtgcgcgggtgttgctggaagacgtgttcaccaatatctgggtcgaaggc
gagatctccaaccttgcccgcccggcctctggtcatgtgtatttcaccctcaaggacagc
ggcgcgcaggtgcgttgcgcgctgtttcgcaacaacgccgcgcgggtgcgtcaggcgttg
aaagatggcctggcagtgaaggtgcgcggcaaggtttcgctgttcgagggccggggtgat
taccagctgatcctggataccgtggagcccgccggtgatggagcattgcgcctggcgttc
gatgcgctgaaggaaaaactcagcgccgaaggcttgttcagcgccgaacgcaaagtgccg
ttgccggcgcaccctcggcgcattggcatcatcagttcgccgactggcgcggtaatccgc
gacatcatcagtgtgttccggcgtcgcgcacccaacattgaactgacactgatcccgacc
gccgtgcaaggccgcgaagcgatcccgcaaattgtgcgcgcattgaaactggcagatgcg
cgtggcttcgatgcgctgatcctggcccggggcggcggttcgctggaagacctctggtgt
ttcaacgaagaagcagtggcccgtgcggtggatgcttgcgtcacgccaatcgtcagcgct
gtcgggcatgagaccgatgtgtccatcagcgacttcgtggccgacgtgcgcgccccgacg
ccctccgctgcagcggaattgctcgcgccggacgccagccatctggtgcgccaagtcgag
aacctgcatcgccgcctggtgatgctgatgcgcaaccgcctgagccacgaccgcctgcgc
ctggagggcatggcgcgacgtttgcgtcaccctggcgagcgcctgcgccagcaagcccag
cgcctggatgatctggacatgcgcctgcgccgagctttcgagcgcagcctcaatacccgc
cgtgagcgcctgatccgcctggaaacccgcctcgccggccaacaccctggcaggcaactt
gcgctgctgcgccaacgcctggacagcctcgccgaacgcctgccccgcgccatgcgcgaa
ggcctcaagtcgcggcgcctgcagctgcaaagccagatgcagacgctgcacgtggtcagc
ccgctggcgaccctgggccgtggttacagcatcctgctggacgaacgcggccaggccatt
cgcaatgccgcccaaacccacaccggccagcgcctcaccgcacgtctcggtgagggccaa
ttgcaagtgcgggtggaagacaaccacctgacacccgtcaccctttcgttattggactaa
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