Pseudomonas lurida: A7318_21285
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Entry
A7318_21285 CDS
T04730
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pfx
Pseudomonas lurida
Pathway
pfx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A7318_21285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfx03400
]
A7318_21285
Enzymes [BR:
pfx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A7318_21285
DNA repair and recombination proteins [BR:
pfx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A7318_21285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AOE81021
LinkDB
All DBs
Position
4695851..4699303
Genome browser
AA seq
1150 aa
AA seq
DB search
MPDATSLSAGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEDDDMGGCGIAAAIDVQLPGSFMWQLYRMVLGRDEIPPKSLLDKAPLTWRLMRLLPEL
IDQPHFEPLQRFLTHDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGE
TKPLNPANCWQAELWRALLLDVGEEGMAESRAGVHQRFIERINSLESAPPGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWADIVADKDLLRNEYKRQARKAGMPVTI
DPQTLHQHAHPLLAAWGKQGRDYISLLDSYDDPNSYRAAFRDGRIDLFSDSEPTTLLNQL
QDDILELRPLNETRELWPAVDLECDTSIRFHIAHSAQREVEILHDQLLQRFSADATLRPR
DIIVMVPDVDSYAPHIRAVFGQLERNDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSR
FHVSEILDLLDVPALRERFAIKERDLPTLHRWIEGAGIRWGLNAEQRAGLGLPTQLEQNS
WRFGLRRMLLGYAVGTGAACDGIEPYDEIGGLDAALIGPLVALLDALNDAHQALSQPAPP
KEWGERLQRLMQLFFLPSSEHDDYLMGQLEQLRETWLETCESVGLQDGLPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEAVLSARDQLYISWVGRSIRDNSDRPASVLVGQLRDHLSSGWHHAQ
SDQPLIEAMTQEHPLQPFSARYFHEGDALFSYAREWQLLYEASDALPTDHDLAPHQQEEP
LSLGQLQDFLRNPVKHFFSQRLKVFFEAAEVPLADEEPFVLDALQRYSLSDSLLNAALTQ
PDHFDQALNAQALRLQGSGLLPMVGFGEYLRNELIEPLPDLLRRYQQLLALWPTPHPGAE
PVSFEHHGVQLEGWISGLHRRSDGGLLSVTTIPNSIGSIKTRKWHRLIRPWVNHVVACAC
GLPLSTGLVASDDTLLLSPLDQSNAQDVLGNLLLAWHVGMSKPLPVAVKTAFAWLGQTDP
AKAQAAASKAYEGDGLTTDGERRETPALTRQFPDYATLIASEEFEGWCETLYRPLLNAPW
RSLTGEEASA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgcaacgtccctcagtgctggattcatggtggttcacggcaaccgcctggac
gaactgcgcagcctggtggtcagttggatgcgccgctaccccctggcgcccctggaaaat
gaaatcgccctggtacaaagtaacggcatcgcccagtggctgaagctggccctggctgaa
gacccggaagatgacgatatgggcggttgtggcatcgccgctgcgatcgatgtgcaattg
cccggcagcttcatgtggcagctttaccgcatggttctgggccgagatgaaattccgccc
aaatccctgctcgataaagccccactgacctggcgtctaatgcgcctgctcccagagctt
atcgatcagccgcacttcgaaccgctgcagcgcttccttacccacgacaccgacctgcgt
aaacgctaccagctcgccgaacgcctggcggacttgttcgaccaataccaggtttatcgc
gccgactggctggaggactgggccgccggtcgccaccaattgcgtaacggccgaggcgaa
accaagcccctcaacccggctaactgctggcaagccgaactgtggcgtgcattgttgctg
gatgtaggtgaagagggcatggccgaaagccgtgccggcgttcaccagcgattcatcgag
cgcatcaattcgctggagagcgccccaccaggcttgccatctcgagtcatcgtcttcggc
atctcctcgttgccagcacaggcgcttgaagcccttgccggcctggcgcgattcagccaa
gtcctgctctgcgtgcacaacccttgtcgccatcattgggccgacatcgtcgctgacaaa
gacctgctgcgtaacgaatacaaacgccaagcgcgcaaagcaggcatgccggtcaccatc
gacccacaaaccctgcaccagcacgcccacccgttactggccgcctggggcaagcaaggc
cgtgactacatcagcctgttggacagttacgacgaccctaatagctaccgggccgcattc
cgcgatggccgcatcgacctgttcagcgacagcgaacccaccacgctgctcaaccagctc
caggacgatatcctcgaactgcgcccactcaacgaaacccgcgagctatggcctgccgtc
gatctggaatgcgatacctcaatccgcttccacattgcccacagcgcccaacgcgaagtc
gaaatccttcacgaccaattgctccagcgcttcagtgccgacgctacgctgcggccccgg
gacatcatcgtcatggtccccgacgtcgacagctacgcgccccacatccgcgccgtgttc
ggtcagcttgagcgcaacgatccacgctttatcccgttcaccctgaccgaccaaggccaa
cgcggtcgcgaccctctgctcattgccgtcgaacacctgctcaaactccccgacagccgc
ttccacgtcagcgaaatcctcgacctgcttgatgttcctgccttacgcgaacgttttgcc
atcaaggagcgcgatctgcccacgttgcaccgctggatcgaaggcgccggtatccgttgg
gggcttaacgccgaacaacgtgccgggctcggactgccaacgcagctggaacaaaacagc
tggcgtttcggccttcgccgcatgttgctcggttacgcagtgggcaccggtgctgcatgt
gacggcattgagccctatgacgaaatcggtggcctcgacgccgcactgatcggcccgctc
gtcgccttgctcgacgcactcaacgacgctcatcaagccttgtcgcaacccgcgcctccg
aaagagtggggcgaacgcctgcagcgcctgatgcaattgtttttcctacccagcagcgaa
cacgacgactacctgatgggccagctcgaacaactccgggaaacctggctggagacctgc
gagtccgtaggcttgcaggacgggttacccctcactgtcgtccgcgaggcctggctggct
ggcctcgaccagggtcgcctgtcccagcgattcctcgccggagctgtcaatttttgcacc
ctgatgcccatgcgtgcgatccccttcaagctggtttgcctgctcggcatgaacgacggc
gattacccgcgcgcgcaacctccgttggacttcgacctgatggggagcgactaccggccc
ggcgaccgttcacgtcgtgaagacgaccgttatctgctgctcgaagccgtgctttcagcg
cgtgaccagctatacatcagttgggttggccgtagcatccgtgacaatagcgatcgcccg
gcctcggtactggtcggccaactgcgtgaccatctcagcagtggctggcaccacgcacag
agcgaccaaccgttgatcgaagcgatgacacaagagcatccgctgcaaccgttcagcgcc
cgctacttccatgagggcgatgcgctattcagctacgcgcgcgaatggcagttactctat
gaagcatccgatgccctcccgacggatcacgacctggcaccccaccaacaggaagagccc
ctgagtctcggccagctccaagacttcctgcgcaacccggtaaaacatttcttcagtcaa
cgtctgaaagtgttcttcgaagccgccgaagtgccactcgctgacgaagagcccttcgtt
ctcgacgcattacaacgctacagcttgagcgacagcctgctcaacgccgcgctcacccaa
cccgatcactttgatcaggccctgaacgcccaggccctgcgcctgcaaggcagtggcctg
ttgccgatggttggtttcggcgaatacctgcgcaacgaactgatcgagcccttgcctgat
ctgctgcggcgctaccagcaacttctggccctgtggcccacgccgcaccccggcgccgaa
ccggtcagttttgagcatcatggtgttcagttggaaggctggatcagcggcctgcatcga
cgcagtgatggcgggttactgagcgtcaccaccattcccaacagcattggctcgatcaag
acccgcaagtggcaccgcctgattcgcccctgggtcaatcacgtggttgcctgcgcctgc
ggcctgccgttaagcactggcctggtggccagcgacgacaccttgctcctgtcacctctg
gatcaatccaatgcccaggacgtgctcggcaacctactgctcgcctggcacgtcggaatg
agtaaaccgctgcctgtcgccgtcaagactgcttttgcctggctcggccaaaccgatccc
gcgaaggcgcaggcggccgccagtaaagcctacgaaggtgatggcctgaccaccgatggc
gaacgtcgcgaaaccccggcgctcacccggcaatttcccgactacgccacactcatcgcc
agcgaagaattcgaaggttggtgcgaaaccttgtatcgccccctgctcaacgccccgtgg
cgatcactcaccggcgaggaggccagcgcatga
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