Pseudomonas fragi: AV641_18120
Help
Entry
AV641_18120 CDS
T04285
Name
(GenBank) diguanylate cyclase response regulator
KO
K11444
two-component system, chemotaxis family, response regulator WspR [EC:
2.7.7.65
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz02020
Two-component system
pfz02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AV641_18120
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AV641_18120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pfz02022
]
AV641_18120
Enzymes [BR:
pfz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
AV641_18120
Two-component system [BR:
pfz02022
]
CheA family
WspE-WspRF (chemosensory)
AV641_18120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
Response_reg
Motif
Other DBs
NCBI-ProteinID:
AMB80848
LinkDB
All DBs
Position
complement(4034899..4035900)
Genome browser
AA seq
333 aa
AA seq
DB search
MSDLQLDDVKTDENSAMVLLVDDQAMIGEAVRRGLALEQNIDFHFCADPHQAIAQAIRIK
PTVILQDLVMPGLDGLTLVREYRNHPATQNIPIIVLSTKEDPLIKSAAFAAGANDYLVKL
PDNIELVARIRYHSRSYMTLLQRDAAYRALRVSQQQLLDTNLVLQRLMNSDGLTGLSNRR
HFDEYLELEWRRALREQTQLSLLMIDVDYFKSYNDSFGHLDGDEALRKVAAAIRDASSRP
SDLPARYGGEEFAIVLPNTSQGGARLVAEKLRQAVQGLIIPHISPAPGSSLTISIGLATL
TPQQGGTCRELISAADKGLYLAKNNGRNQVGIS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacttgcagttggacgacgttaaaactgacgaaaactcggccatggtgttgctg
gtagacgatcaggcgatgatcggcgaagccgtacgtcgcgggctggcgctggagcagaac
atagatttccatttctgtgccgatccccatcaggccattgcccaggcgatccgcatcaag
ccgacggtgatcctgcaggatctggtcatgccggggcttgatggcttgaccttggtgcgc
gaataccgcaaccacccggccacgcagaatatcccgatcatcgtgctttccaccaaagaa
gacccgttgatcaaaagtgcggccttcgcggccggggccaatgactatctggtgaaactg
cccgataacattgagctggtggcccgtattcgctaccactcgcgctcttacatgacgttg
ttgcaacgtgatgctgcataccgggcgttgcgggtcagtcagcagcaattgctggatacc
aatctggtattgcagcggctgatgaactccgacggcctgaccgggctgtccaatcgccgg
catttcgatgagtacctggagctggagtggcgccgcgccttgcgtgagcagacccagctg
tccttgttgatgatcgacgtcgactatttcaagtcctataacgatagcttcggtcatctg
gatggcgacgaagcattgcgcaaagtggccgcggccattcgcgatgccagtagccgtcct
tccgacttgccggcccgctatgggggtgaagagtttgccattgtgttgcccaacacctcc
cagggcggtgcccggctggtggcggaaaaactgcgccaggcggtgcaggggctaataatc
ccgcatatatcgcctgctcccggcagcagcctgaccatcagcattggtctggctaccctt
accccgcagcagggcggcacctgccgtgagctgatttccgcagcggacaaagggctgtac
ctggccaagaacaacggtcgtaaccaggtaggaatctcgtag
DBGET
integrated database retrieval system
