KEGG   Pseudomonas fragi: AV641_19005Help
Entry
AV641_19005       CDS       T04285                                 

Gene name
gatB
Definition
(GenBank) glutamyl-tRNA amidotransferase
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
pfz  Pseudomonas fragi
Pathway
pfz00970  Aminoacyl-tRNA biosynthesis
pfz01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pfz00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AV641_19005 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:pfz03029]
    AV641_19005 (gatB)
Enzymes [BR:pfz01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     AV641_19005 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     AV641_19005 (gatB)
Mitochondrial biogenesis [BR:pfz03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    AV641_19005 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey
Motif
Other DBs
NCBI-ProteinID: AMB81020
UniProt: A0A0X8F0E8
LinkDB All DBs
Position
4218420..4219865
Genome map
AA seq 481 aa AA seqDB search
MQWEVVIGLEIHSQLATQSKIFSGSATTFGAEPNTQASLVDLGMPGVLPVLNQEAVRMAV
MFGLAVDAEIVQHNVFARKNYFYPDLPKGYQISQMELPIVGMGHLDITLEDGTVKRVGIT
RAHLEEDAGKSLHEDFSGSTGIDLNRAGTPLLEIVSEPDMRSAKEAVAYVKAMHALVRYL
GICDGNMAEGSLRCDCNVSIRPVGQAEFGTRCEIKNVNSFRFIEKAINSEVRRQIELIED
GGKVIQQTRLYDPNKDETRAMRSKEEANDYRYFPDPDLLPVVIEDSFIEDVRATLPELPP
QKRERFQSQFGLSAYDASVLASSREQADYFEKVVNIAGDAKLAANWVMVELGSLLNKQSL
DIDQSPVSAEQLGGMLLRITDNTISGKIAKVVFEAMANGEGSADEVIDKRGLKQVTDSGA
IEKVLDDVLAANAEQVEQYRAADEAKRGKMFGFFVGQAMKASKGKANPQQVNELLKSKLE
G
NT seq 1446 nt NT seq  +upstreamnt  +downstreamnt
atgcaatgggaagttgtgatcgggctggaaattcattctcagctcgccacccaatcgaag
attttctccggtagcgccaccacctttggtgccgaaccgaacacccaggccagcctggtt
gatctgggcatgcctggcgtattgccggtgctgaaccaggaagccgtgcgcatggccgtc
atgtttggtctggcggttgatgctgaaatcgttcagcacaacgtgtttgcccgcaaaaac
tacttctaccccgacctgcccaagggctaccagatcagccagatggagttgccgatcgtc
ggcatgggccatctggacatcactctggaagacggcaccgtcaaacgtgtcggcatcacc
cgcgcgcacctggaagaagacgcgggcaaaagcctgcacgaagacttcagcggctccacc
ggcatcgacctgaaccgtgccggtacgcccctgctcgaaatcgtttccgagccggacatg
cgtagcgccaaggaagccgtagcctacgtcaaggcgatgcacgccctggtgcgctacctg
ggcatctgcgacggcaacatggccgaaggttcgctgcgttgcgactgcaacgtgtcgatt
cgcccggttggccaggctgagttcggtacccgctgcgagatcaaaaacgtcaactcgttc
cgctttatcgaaaaagccatcaacagcgaagtgcgacgtcagatcgagctgatcgaagac
ggcggcaaggtgattcagcaaacgcgcctgtatgacccgaacaaggacgaaacccgcgcc
atgcgcagcaaggaggaagccaacgactaccgttacttccccgatccggacctgctgccg
gtggtcatcgaagattcgttcatcgaagacgtgcgcgccaccctgccggaactgccaccg
caaaagcgcgagcgcttccagtcgcagttcggcctttccgcttatgacgccagcgttctg
gcttcgagccgtgaacaggccgactacttcgagaaagtggtaaacatcgccggcgacgcc
aaactggcggccaactgggtcatggttgaactgggcagcctgctcaacaagcaaagcctg
gatatcgaccagtcgccggtcagcgccgagcaactgggtggcatgttgctgcgcatcacc
gacaacaccatctccggaaaaatcgccaaggtggtgttcgaagccatggccaatggtgaa
ggcagcgccgacgaagtgatcgacaagcgcggtctcaagcaagtgaccgacagcggcgcg
atcgagaaggtgctggacgacgtgctggcggccaacgcagaacaggtcgaacaataccgc
gcggccgatgaagccaaacgcggcaagatgttcggctttttcgtgggccaggcgatgaaa
gcttccaaaggcaaagccaacccgcaacaggtcaacgaactgctcaaaagcaagctcgaa
ggctaa

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