Phaeobacter inhibens DSM 17395: PGA1_c26270
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Entry
PGA1_c26270 CDS
T02192
Name
(GenBank) putative D-alanyl-D-alanine carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga00550
Peptidoglycan biosynthesis
pga01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PGA1_c26270
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pga01002
]
PGA1_c26270
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pga01011
]
PGA1_c26270
Enzymes [BR:
pga01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PGA1_c26270
Peptidases and inhibitors [BR:
pga01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
PGA1_c26270
Peptidoglycan biosynthesis and degradation proteins [BR:
pga01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PGA1_c26270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
LysR_substrate
DUF5110
Motif
Other DBs
NCBI-ProteinID:
AFO92295
UniProt:
A0AA85ZE73
LinkDB
All DBs
Position
complement(2734707..2736191)
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AA seq
494 aa
AA seq
DB search
MISRRFFLTTCLASAAANTALANAPAVSLRPVARDPASLIRAGGGLKGLLSRAGLSGEVA
CAVADVKTGLRLEAEGAGAGLPPASVAKALTALYALDALGADHRFTTQIVATGGISGGVV
AGDLVLVGGGDPMLNTDTLAQLAQALKTAGIREVRGAFRVWEGALPQIRTIDPGQPDHVG
YSPAISGLALNYNRVHFEWKRAGQGWAVTMDARTKKYRPEVSVATMKIAQRSLPVYSYSE
GKDTDRWTVASKALGKGGARWLPVRHPGAYTADVFRTMARANGVKLGNPKMAKSRPSGQV
VAHHNSPPLDLMLKATLKYSNNLMAEMIGLAATQARGGRPRSLRDSAAEMNRWAAATYGM
ANTRLVDHSGLGEDSRVTPDDMVSVLVAAYRDGRLKPLLKSFPMRDSKGRILKGHPIKVA
AKTGTLNFVSGLGGFMTATDGTVLAFAIFSADQKARSRISRAERERPQGARSWNRRAKQV
QQKLIERWGRVYGS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgcgacgtttttttctgaccacctgcctcgcctctgcggcggcgaacaccgcc
ctggccaatgcgcctgcggtctctctgcgtccggtggcgcgcgatccggccagcctgatc
cgcgctggtggcgggctgaaggggctgttgtcccgcgcaggcctctcgggtgaggttgcc
tgcgcggtggccgatgtgaaaaccggtttgcggctggaggccgaaggggcaggtgccggg
ttgccgccagccagtgtcgccaaggcgctgaccgcgctttatgcgctggatgcgctgggg
gctgaccaccgctttaccacgcagattgttgccaccggcggcatcagcggcggtgtggtt
gcgggcgatctggtgcttgtgggtggcggcgatccgatgctgaacacagatactctcgcg
cagctggctcaggcgctcaagactgcgggcatccgcgaagtccgcggcgccttccgcgtc
tgggagggcgcgctgccgcagatcaggacaattgatcccggccaacccgatcatgtcggc
tatagcccggcgatttcaggactggcgctcaattacaaccgggtccattttgagtggaag
cgcgcaggccagggctgggccgtcaccatggatgcccggaccaagaaatatcgccccgag
gtctctgttgcgacgatgaaaatcgcacagcgcagcctgccagtttacagctactccgag
ggcaaggacaccgaccgttggactgtcgccagcaaggcgctgggcaaaggaggcgcgcgc
tggctgcccgtgcgccatccgggggcctacacggcggatgtcttccgcaccatggcgcgc
gccaatggcgtcaagctgggcaacccgaagatggccaagtcccgcccctcggggcaggtg
gtggcccatcacaacagcccgccgctggatctgatgctgaaggcgacgctgaaatattcc
aacaatctgatggccgaaatgattggtctggctgcgacgcaggcacgcggcgggcggccc
cgcagtctgcgcgactctgccgcggagatgaaccgctgggcggcggcaacctatggtatg
gccaacacccggctggtggatcactccggccttggcgaggattcgcgggtgacgccagat
gatatggtcagcgtgctggttgccgcctatcgcgatgggcggttgaaacctctgctgaag
tcctttcccatgcgcgacagcaagggccgtatcctgaaaggccacccgatcaaggtcgcg
gccaagaccgggacgctcaacttcgtgtccggtctgggcggtttcatgacggccaccgat
ggcaccgtgctggcctttgccattttcagtgccgatcagaaggcgcggtcccgcatctcg
cgggcggagcgcgaacgcccgcagggggcaagatcctggaaccgccgcgccaaacaggtg
caacaaaagctgattgagcgatgggggcgggtttacggcagttga
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