Pseudomyrmex gracilis (graceful twig ant): 109856928
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Entry
109856928 CDS
T05003
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109856928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgc03400
]
109856928
DNA repair and recombination proteins [BR:
pgc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109856928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
vRNAP_dom
Motif
Other DBs
NCBI-GeneID:
109856928
NCBI-ProteinID:
XP_020288290
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MAVQPNQQFSMDPPTQQSFVRFLKNLPEKPETTIRIFNRSDYYTVHGSDALFAAQEIFKT
TSVCKIIGAEPHKTEGVILNKSHFETFVRDLLLVKQYRVEVYVNQGSSKNQNWVLEFKGS
PGNLAHFEDVLFGNTDIAVGVSVIAVRLGTEGKSRVVGLSCVDVVSTLISVAEFQDNESF
SNLESLVVTLAPKECLLIQGEGSYEFQTLKQIIERSNVLVTLRKKSEFSSDSIIDDLNTL
IKFKKGQKQNVQSLPEVNLSLAMSATSALIKYLDLTSDEGNMNQFSLNQVEQSRYIRLDS
AAIKALNIEPTVDVASNLHGNPVGSILTLLDKCRTPQGHRLIAQWVRQPLRDLSLIKERH
DIVELFVKNNELRSVLSDDYLRRIPDLQQLAKKLARKKSALQDCYKIYLCVSHLPKLLEQ
LSSEANVAALKAMIIDPLKELIEDMDKFQQLVEQTIDLDAAEKGDFMINPGFSDDFKGLK
DSMDEMEEIIQKQLGKVADDLCLEAGKVIKLESNQQFGYYFRITLKEEKVLRNKKHYTIL
DSNKTGVRFRNSKLYELNEDFIAIRHKYMEKQKDVIGEIVEIAAGYSETVRTIGGVLACL
DILTAFASAAVSANKVYARPEMLPSEKGELNLVQVRHPCLEMLQGVDYIANDVSFKRDQC
HFCIITGPNMGGKSTYIRSVGVTALMAHIGSFVPCDKATISLLDCILARVGADDSQLKGL
STFMMEMIETAAILKTATCNSLVIIDELGRGTSTYEGCGIAWSIAEHLAKDIKSYCLFAT
HFHEITRLAEEIPTVKNQHVTALVDGNKLTLLYKVMPGICDQSFGLHVAKMANFPQDVIE
FAKRKQAELEDYQGILFEGSDNPQKKRKIIQEAETIISEFLTKCKTLDNSLSDADLESQI
SSLKQNALSRKNPYIEALLIAS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaacccaatcaacaatttagcatggatccccctacgcaacaaagttttgtc
agatttttaaaaaatcttccagagaaacctgagacaacgatacgaatcttcaatagatct
gattattacacagtgcacggaagcgatgccttgtttgccgcacaagaaatattcaaaaca
acgtccgtttgtaaaattatcggagctgaaccgcacaaaacggaaggtgttattcttaat
aagagccattttgaaacatttgtgcgcgatttgttgttagttaaacaatacagagttgaa
gtttacgtcaatcagggttcctcgaagaatcagaactgggttttagagttcaaaggttcg
cccggcaacttggcgcatttcgaagacgttttgtttggcaatactgacatagctgtaggt
gtgtccgtaatagctgtgagactaggtaccgagggaaaatcccgggtcgtcggtttgagt
tgcgtggacgttgtgtctactttaatttcagtggccgaatttcaagacaacgagtcgttt
tcaaatctggagtcgctggttgtaactctcgctccgaaagaatgtctgttaattcaagga
gagggaagttacgaatttcaaactcttaaacaaataatagaaagaagcaatgtattggtg
actttaagaaaaaaaagtgaattttccagtgattcaattatagacgatctgaatacgttg
ataaaatttaaaaaaggacagaaacagaatgtgcaatcgctaccagaggtcaatttaagt
ctagccatgtctgccacttctgctctcattaaatatttagacttaacatcggacgaaggc
aatatgaatcagttctctctaaatcaagtggagcaatcgcgatatataaggctagattct
gcggcaataaaagccctcaacatcgaaccaactgtagatgtggcttctaatttacacgga
aatcccgttggcagtattttgacactgctggacaaatgtagaaccccacaaggacacaga
ctgattgcgcaatgggttcggcagcctcttagagacttgtctctgataaaagaacggcac
gacatcgttgaattgttcgtaaaaaacaacgaattacgatctgttctaagtgacgattat
ttgagacgtataccggatttgcaacagctcgcgaaaaaattggccagaaagaaatcggca
cttcaggattgttacaaaatctacctgtgtgtatcacacttgccaaaactattagaacaa
ctttcgtccgaagcgaatgtggcggcattgaaagcaatgataatagatccattgaaagaa
cttattgaagatatggataagtttcaacaactagttgaacagacaatcgatttagatgct
gccgaaaagggcgatttcatgatcaatccaggattttcggatgacttcaaaggattaaaa
gattccatggacgaaatggaagaaattatacagaaacaactcggtaaagtagcggatgat
ctctgcttggaagcgggaaaagtaataaaattggaatctaatcaacagttcggctattac
tttcgcatcacgttgaaagaagagaaagtacttaggaataagaagcactacacaattttg
gattctaataaaactggtgtaagatttcgaaacagtaaattgtacgaattgaatgaggac
tttatagccatcagacataagtacatggaaaaacagaaagatgttattggggaaattgtg
gaaattgcagctggttatagcgaaacagtgcgtactatcggcggtgtgctggcatgtctc
gacattcttaccgcgtttgcttctgcagcagtaagcgcgaacaaagtatacgcgcgtccc
gagatgctcccgagtgaaaaaggcgaattgaatcttgttcaagtcagacatccttgtttg
gaaatgctacaaggagtagattatatcgccaatgacgtcagctttaaacgagatcaatgt
cacttttgcattattactggtccaaatatgggaggtaaaagtacttacattagatctgtt
ggtgtaaccgcactaatggctcacatcggtagttttgttccttgcgacaaagcgactata
tcgttactggattgtatactggctcgagtgggagccgacgattcccaactaaaaggattg
tcaacttttatgatggaaatgatagaaacagctgccattttaaaaacagcaacgtgtaat
tctctcgtaattattgacgagttggggagaggaacttccacttacgagggttgtggtata
gcttggtcaatagcagagcatttggcaaaagatattaaatcgtactgcttgtttgccaca
catttccacgaaattacaagattggctgaagaaatacctactgtaaaaaatcaacatgtc
accgctcttgtcgacggcaataaattgacgttactttataaagtaatgccaggaatttgc
gaccagagctttggtcttcacgttgccaagatggctaatttcccacaagatgtgatagag
tttgccaaaaggaagcaagcagaacttgaggactatcaaggtatactttttgaaggatct
gataatccacagaagaaaagaaaaatcattcaggaagctgagacgattatctcggagttt
ttgacaaaatgtaaaactttggataactctttatctgatgctgacttagaaagtcagata
tcatcgttgaagcaaaatgctctctctcgtaaaaatccttatattgaagctttgttaatc
gcttcttaa
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