Pseudomyrmex gracilis (graceful twig ant): 109861419
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Entry
109861419 CDS
T05003
Name
(RefSeq) GATA zinc finger domain-containing protein 10-like isoform X1
KO
K14323
protein CASC3
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03013
Nucleocytoplasmic transport
pgc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109861419
03015 mRNA surveillance pathway
109861419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109861419
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109861419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
109861419
NCBI-ProteinID:
XP_020296647
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MSDIRRRRRSDQSCGSDLSDSCEELNATKETQSSEQTDGHQDSECDIYEDSESNSDTESQ
EGRELRESGDGQEEEKPQKKLADDEDRRNPQYIPKRGTFYEHDDRTTDEVTDANTEVQTN
VKKTKEKKVWKDKEDKWDHDRYNDEEQAPKKPEELIATYGYDIRNEEGPPRARRRRRYGR
GPNKYTRNWEDEDAYGKTTSSRGNRRFHKNNEEFPALGNNKNALNKMEEPVISSAWYSSK
SKTQNKTQNFPPLQSQQDNVKSTLTVSNTVTNENKSLDESANTWKKDNKHAIQNQNANGN
IGSSNDTTNAKLLPRETSKRSNLQESVSLAASRTRGRGFKTNANNNMVTNRIVENKSKGR
GFGLVTVENRRNPPAQHNDEHQLVHDMKQVNVNDSGQYHQPARHNKSYFPSSNQHRSNAV
PPRMQQQQSHQQQTHSQQTIQPQQQQQQQQQQQQQQQQQDGSGNRPKRYSSLRQRPISET
SAQQNYPSQHAQHGYFSPQAGNSRAVLESQGYPQGHFEQSSPVSPATAPMGGQPVISLPP
GGQPASYAPPPFLVPPPQFIPPQTAPPSIINYVPGPNGPTFPPNFQGYQGYNPSVQPQGP
PQELFQPQGCTYYSPAQQQQQQQQTAPLRRPKAAIPILPPPDNQQSGRGRGRNTQQYQHN
NQPGSNITQQTEQQEIKNSNAMESDEKSIPGQFDSAEQSITLNEESSQKSQASDRIVNNA
DEKSKNNINADVHIDVDALPIKKDNIDDSVSVTDLVEANCNEKNTISHSPTLVTTETERE
LANIESTIPENTIVEEAAA
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacatacgtcgacgtcgaagatctgatcaatcgtgcggttccgatctttcggac
tcttgtgaagaactaaacgcgacaaaggagactcagagtagtgaacagactgatggacat
caggattcagaatgtgatatttatgaagattcagaaagtaactctgatactgagtcacaa
gaaggtagggaattacgagaaagtggagatggtcaggaagaagagaaaccacaaaagaag
ttggctgatgatgaggatagacgtaatccacaatatattccaaaacggggaacattttat
gaacatgatgatcgaacaactgatgaagtaactgatgccaacacagaagtgcaaacaaat
gtgaaaaaaactaaagaaaagaaagtatggaaggacaaggaagacaaatgggatcatgat
cgatacaatgatgaagaacaagcccccaaaaaacctgaagaactaatagcaacatatggt
tatgatattagaaatgaagaaggacctcctagagctaggaggagaagaagatacggtcgt
ggacccaacaaatacacaagaaattgggaagatgaagatgcttatggaaagactacttct
agtagaggaaacagacgttttcacaaaaataatgaagagtttcctgctcttggtaataat
aagaatgctttaaataaaatggaagaacctgtgatttcatctgcttggtatagcagcaaa
agtaaaacacaaaataaaactcaaaattttccgccacttcaatctcaacaggacaatgta
aaatccacacttactgtctctaatactgtcacaaatgaaaacaaatcgctagatgaatct
gctaatacttggaaaaaagataacaaacatgctattcaaaatcaaaatgcaaatggaaat
atcggatctagcaatgatacaactaatgccaaattattgccaagagagaccagtaagaga
agcaatcttcaagaatctgtaagcttagcggcgagtaggacgcgtggaagaggtttcaaa
acaaatgctaataacaacatggtcactaacagaatagtagagaataaatcaaaaggacgt
ggttttggtctagtcacggttgagaatagaagaaatcctcctgcgcaacacaatgacgag
catcaactcgttcacgatatgaaacaagtcaatgttaatgacagtggtcaatatcatcag
cctgcaagacataacaaaagctacttcccatcttccaatcaacatagatcaaatgcagta
ccgcctagaatgcagcaacaacagtcacatcaacaacaaacacattcgcagcaaacaata
caaccgcagcaacagcagcagcagcagcaacaacaacaacaacaacaacaacaacaagat
ggttctggaaacagacctaaacgatactccagtcttcgtcaacgaccgatttcagaaaca
tctgcacaacaaaattatccttctcaacacgcccaacatggatatttttcacctcaagct
ggaaactcaagagccgttctagaatctcaaggctatccacaaggtcatttcgaacaatct
tctcctgtgagtccagctacagcacctatgggaggacagcccgttatttctttacctcct
ggtggacagccagctagttatgcaccaccaccattcttagtaccaccgccacaatttata
cctcctcaaacggcgcctcctagtataatcaattacgttcccgggccaaatggcccaaca
tttccaccgaactttcaaggctaccaaggatataatccttcagtgcagcctcaaggtcca
ccacaagagctgtttcaaccacaagggtgtacttactatagtcctgctcagcagcaacaa
cagcaacaacaaactgctcctctgcgacgaccaaaagctgcaatacctattcttccacca
cctgataatcagcaaagtggcagaggaagaggtagaaatactcagcaatatcaacataat
aatcaacctggtagtaatatcacgcaacagactgaacaacaagaaatcaagaatagtaac
gcaatggaaagtgacgaaaaatctataccgggacagtttgatagtgccgaacaatcgatt
acactgaatgaagaatcgagtcagaaaagtcaagcttcggatagaatagtgaacaatgct
gacgagaagagcaaaaataacattaatgcggatgttcatatagacgttgatgcgttgcct
attaaaaaagataacatagacgatagcgttagtgtaactgatttggtggaagccaattgt
aacgaaaagaacacgatttcacacagtccgacattggtcactactgagactgaacgtgaa
ttagctaacattgaatctacaattcctgaaaatacaattgtcgaagaagcagcagcctaa
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