KEGG   Phaeobacter inhibens 2.10: PGA2_c15030Help
Entry
PGA2_c15030       CDS       T02193                                 

Gene name
gyrA
Definition
(GenBank) DNA gyrase subunit GyrA
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
pgl  Phaeobacter inhibens 2.10
Brite
KEGG Orthology (KO) [BR:pgl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgl03032]
    PGA2_c15030 (gyrA)
   03400 DNA repair and recombination proteins [BR:pgl03400]
    PGA2_c15030 (gyrA)
Enzymes [BR:pgl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PGA2_c15030 (gyrA)
DNA replication proteins [BR:pgl03032]
 Prokaryotic type
  DNA Topoisomerases
   PGA2_c15030 (gyrA)
DNA repair and recombination proteins [BR:pgl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PGA2_c15030 (gyrA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C HIN
Motif
Other DBs
NCBI-ProteinID: AFO87507
LinkDB All DBs
Position
complement(1659880..1662636)
Genome map
AA seq 918 aa AA seqDB search
MNDTPETPENMDENKPERPKYDGPTVSIESEMRTSYLDYAMSVIVSRAIPDLRDGLKPVH
RRILYAMHEVGNSHDKPYRKSARPVGDVMGKYHPHGDSAIYDALVRMAQDFSMSLPLLDG
QGNFGSMDGDNPAAMRYTEVRMDKPAASILADIEKDTVDFQDNYDGKDREPTVLPARFPN
MLVNGAGGIAVGMATNIPPHNLGEVIDATLALIEDPDLTSEQLIDYVPGPDFPTGGVMLG
RSGARKAYLEGRGSVVIRAKTRVEEIRKDRYAIVVEEIPYQVNKAAMIEKIAEQVREKKI
EGVSHVQDESDRNGVRVVVELKRDATAEVVLNQLYRFSPMQTHFGCNMLALNGGRPEQLT
LRRFLTSFLDFREDVIARRTAYDLRKARERSHILCGLAVAVSNVDEVVATIRASADAAEA
RHKLMTRRWPAVDIAPYIRLIDDPTHTMNDDGTYNLSEVQARAILELRLQRLTQIGVKEV
TDELEELAGKIKEYLEILSSRERILGIISDELREVRDNFAVPRRTEIVDWSGDMEDEDLI
EREDMVVTITSGGYIKRTPLVDFRAQKRGGKGLSGMQTKEEDVVTNLFVANTHTQLLFFT
TDGMVYKLKTWRLPQGGRTSKGKAIVNILPIPPGVSIAAIMPVDVPDDEWENLQVVFATS
GGDVRRNRLSDFTNVRRNGKIAMKLPEDGSVKLVNARICSEDDDVMLVTNSGRAIRFRST
DVRVFNSRESTGVRGIRLVSEGDEVVSMSVIRHFSAEPWERNAFIKRFRSELGGEVAEDE
NGEESEGSLSEERYQEMLAANDLLVTINRSGVGNLTSAHDYRVSGRGGQGVGAMKGGAIV
ATFPVELEDQIMLATSKGQSIRCPVNGISFRSRSAGGVRVFNTAKGEEVVSVAWIAERDD
EDAEVPTSEGTSEPTETT
NT seq 2757 nt NT seq  +upstreamnt  +downstreamnt
gtgaacgatacgccggaaactcctgaaaacatggacgaaaacaaacccgaacggccaaag
tatgacggcccgacggtgtccatcgaatccgagatgcgcacttcgtatctcgactatgcg
atgtcggttattgtcagccgcgccattcctgacctgcgtgacggtctgaaaccggttcac
cgccggattctctacgccatgcatgaggtcggcaattcgcatgacaaaccctatcgcaaa
tcggcgcgtccggttggtgatgtcatgggtaagtaccacccccatggtgactccgcgatc
tatgacgccttggtgcggatggcgcaggatttctccatgtcgctgccgctcttggatggt
cagggcaacttcggctccatggatggcgataacccagccgccatgcgctataccgaagtg
cggatggacaaacccgccgcgtcaatcttggctgatattgaaaaagatacggtcgatttt
caggacaactacgatggcaaggaccgtgaacccacggtgctgccggcgcggttccccaac
atgctggtcaatggcgctggcggtattgccgttggcatggcgacaaatatcccgccccac
aatctgggcgaagtgattgatgccacgctcgcgttgatcgaagacccggatctgaccagc
gaacagttgatcgactatgtacccggcccggacttcccaaccggcggcgtgatgttgggc
cgttccggcgcgcgcaaggcctatctggaagggcgcggcagcgtcgtcattcgcgccaag
acccgcgttgaggagatccgcaaggaccgctacgcgatcgtggtcgaagaaatcccctat
caggtcaacaaggcggcgatgatcgaaaagatcgccgaacaggtacgcgagaaaaagatc
gaaggtgtcagccacgtacaggatgaatccgatcgcaacggcgtgcgtgtcgtggttgag
ctgaaacgcgatgccacggccgaggtggttctgaaccagctctatcgtttctcacctatg
cagacgcattttggctgcaacatgctggccttgaacggtggtcgtcccgagcagctgacc
ctgcgccggttcctgacctccttccttgatttccgcgaagacgtgattgcgcggcgcacc
gcctatgacctgcgcaaggcgcgggaacgcagccatattctgtgcggtttggccgtcgcg
gtttcaaatgtggacgaggtggtcgcaaccatccgtgcctctgctgatgcagccgaagcc
cgacataagctgatgacccgccgctggcccgcggtcgacatcgcaccttatatccgtctg
attgacgatccgacccacaccatgaatgacgatggcacctataacctctctgaggtgcag
gcccgcgctattctcgaactgcggttgcagcgcctgacacagattggtgtcaaagaagtc
accgatgagctggaagaactggcgggcaagatcaaggaataccttgagatcctgtcctcg
cgtgagcggattctgggcatcatctcggacgagctgcgcgaagtgcgcgataatttcgcc
gttccccgccgcaccgagatcgtagactggtccggcgacatggaagacgaggatctgatc
gagcgcgaagacatggtcgtgacgatcacgagcggcggctatatcaagcggaccccactg
gtcgacttccgggcgcagaagcgcggcggcaaggggctgtctggcatgcagaccaaggaa
gaggatgttgtcaccaatctctttgtggccaacacccacacccagctgctgttcttcacc
actgacggcatggtctacaaactgaagacctggcgtctgccacagggtggccgcacgtcc
aaaggcaaggcgattgtcaatatcctgccaattccgcctggcgtctccatcgccgcgatc
atgccggtcgatgtgccggatgacgaatgggaaaacctgcaggtggtctttgccacctcg
ggcggggatgtacgtcgcaaccgtctgtcggatttcaccaatgtccgccgcaatggcaag
atcgcgatgaaactgcccgaggatggctcggtcaaactggtgaatgcccgcatctgttcc
gaggacgatgatgtgatgctggtgaccaattccgggcgggcgatccggttccgctccacc
gacgtccgcgtcttcaactcccgtgaatcgaccggggtgcgcgggatccggctggtgagc
gaaggggacgaggtcgtctcgatgtcggtgatccgccacttcagcgcagaaccctgggag
cgcaatgccttcatcaagcggttccgctccgagcttggcggcgaggttgccgaagacgaa
aatggcgaggagtccgaaggttcactgtccgaggagcggtatcaggaaatgctggcggcc
aatgatctcctggtgaccatcaatcgctctggagtgggcaatctgacatcggcccatgac
taccgtgtcagcgggcgtggcggtcagggtgttggtgccatgaaaggcggcgccatcgtc
gcgaccttcccggtcgagcttgaagatcagatcatgctggccacctccaaaggtcagtcg
atccgctgtccggtcaacgggatttctttccgttcccgcagcgccggtggcgtacgggtg
ttcaacacagctaagggcgaagaggtcgtctcggttgcctggatcgcggaacgcgacgac
gaagatgcagaagtccctacctctgagggtaccagcgaacctaccgagacaacctga

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